Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS12735

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,781,163	+		HGI48_RS12730	0.29	-0.2
2,781,163	+		HGI48_RS12730	0.29	+0.2
2,781,164	-		HGI48_RS12730	0.29	+0.2
2,781,201	+		HGI48_RS12730	0.32	+0.0
2,781,201	+				+0.7
2,781,202	-		HGI48_RS12730	0.32	+0.2
2,781,358	+		HGI48_RS12730	0.46	+0.6
2,781,374	+				+0.9
2,781,474	+		HGI48_RS12730	0.56	-0.5
2,781,478	+		HGI48_RS12730	0.57	-0.0
2,781,479	-		HGI48_RS12730	0.57	+0.2
2,781,479	-		HGI48_RS12730	0.57	+0.3
2,781,641	+		HGI48_RS12730	0.71	-0.8
2,781,641	+		HGI48_RS12730	0.71	-1.2
2,781,651	-		HGI48_RS12730	0.72	+0.2
2,781,690	-		HGI48_RS12730	0.76	+1.0
2,781,745	+		HGI48_RS12730	0.81	-0.8
2,781,745	+		HGI48_RS12730	0.81	-1.8
2,781,746	-		HGI48_RS12730	0.81	+0.2
2,781,746	-		HGI48_RS12730	0.81	+0.2
2,781,746	-		HGI48_RS12730	0.81	+0.5
2,781,766	+				+2.0
2,781,766	+		HGI48_RS12730	0.82	+0.9
2,781,806	+		HGI48_RS12730	0.86	+0.3
2,781,806	+		HGI48_RS12730	0.86	-0.8
2,781,838	+		HGI48_RS12730	0.89	+0.3
2,781,838	+		HGI48_RS12730	0.89	-1.2
2,781,863	+				+1.3
2,781,903	+				-0.5
2,781,904	-				-0.1
2,781,938	+				+0.3
2,781,939	-				-0.0
2,781,939	-				-1.8
2,781,939	-				-0.8
2,781,940	+				-0.2
2,781,940	+				+1.2
2,781,952	-				-0.8
2,781,979	+				-0.4
2,781,980	-				-0.8
2,781,992	+				+0.2
2,782,089	+				-1.0
2,782,115	+				+1.7
2,782,116	-				-0.1
2,782,116	-				-0.8
2,782,142	-				-0.8
2,782,260	+		HGI48_RS12735	0.11	+0.2
2,782,366	-		HGI48_RS12735	0.21	+0.6
2,782,374	+		HGI48_RS12735	0.22	+0.2
2,782,375	-		HGI48_RS12735	0.22	-0.1
2,782,383	-		HGI48_RS12735	0.22	-0.7
2,782,411	+		HGI48_RS12735	0.25	-0.3
2,782,462	-		HGI48_RS12735	0.30	-1.4
2,782,497	+		HGI48_RS12735	0.33	-0.8
2,782,498	-		HGI48_RS12735	0.33	-0.2
2,782,498	-		HGI48_RS12735	0.33	-0.4
2,782,501	+				+0.2
2,782,501	+		HGI48_RS12735	0.33	+1.4
2,782,546	-		HGI48_RS12735	0.38	-0.6
2,782,649	-				-1.4
2,782,683	-		HGI48_RS12735	0.50	+0.4
2,782,733	-		HGI48_RS12735	0.55	+1.9
2,782,809	+		HGI48_RS12735	0.62	-1.1
2,782,816	-		HGI48_RS12735	0.63	+0.3
2,783,023	+		HGI48_RS12735	0.82	+0.1
2,783,357	-				-1.0
2,783,419	+				+0.6
2,783,499	+				-1.4
2,783,499	+				+0.5
2,783,541	+				+0.1
2,783,589	-				-0.6
2,783,644	+		HGI48_RS12740	0.32	+0.5
2,783,775	+				-0.1
2,783,775	+				-1.4
2,783,775	+				+0.3
2,783,775	+				+0.6
2,783,776	-				+0.6
2,783,776	-				-1.8
2,783,776	-				+1.2
2,783,776	-				-0.5
2,783,777	+				-0.4
2,783,780	-				+0.8
2,783,794	+				+0.6
2,783,914	+		HGI48_RS12745	0.16	-2.2
2,783,914	+		HGI48_RS12745	0.16	-0.4
2,783,914	+		HGI48_RS12745	0.16	-0.1
2,783,914	+		HGI48_RS12745	0.16	+0.6
2,783,914	+				+0.9
2,783,914	+		HGI48_RS12745	0.16	+0.0
2,783,914	+		HGI48_RS12745	0.16	+0.2
2,783,914	+		HGI48_RS12745	0.16	-0.1
2,783,914	+		HGI48_RS12745	0.16	-1.0
2,783,914	+		HGI48_RS12745	0.16	+0.2
2,783,914	+		HGI48_RS12745	0.16	-2.2
2,783,914	+		HGI48_RS12745	0.16	+0.1
2,783,915	-				-0.8
2,783,915	-		HGI48_RS12745	0.16	-1.8
2,783,918	+		HGI48_RS12745	0.17	+0.8
2,784,021	-		HGI48_RS12745	0.48	+0.6
2,784,047	+		HGI48_RS12745	0.56	+0.1
2,784,047	+		HGI48_RS12745	0.56	+0.2
2,784,047	+		HGI48_RS12745	0.56	+0.2
2,784,048	-		HGI48_RS12745	0.57	-0.2
2,784,074	-		HGI48_RS12745	0.65	-1.0
2,784,149	+		HGI48_RS12745	0.87	+0.8
2,784,170	+				+0.2