Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS12670

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,768,463	+				-1.2
2,768,464	-				-0.7
2,768,464	-				+0.4
2,768,688	+		HGI48_RS12665	0.40	-2.2
2,768,732	+		HGI48_RS12665	0.46	+0.1
2,768,965	-		HGI48_RS12665	0.79	+0.7
2,769,105	+				-2.2
2,769,106	-				-0.3
2,769,205	+				+0.6
2,769,206	-				+0.7
2,769,219	-				+0.2
2,769,219	-				-0.4
2,769,293	+		HGI48_RS12670	0.22	-0.5
2,769,293	+		HGI48_RS12670	0.22	-0.5
2,769,293	+		HGI48_RS12670	0.22	-2.0
2,769,294	-		HGI48_RS12670	0.22	-1.9
2,769,294	-		HGI48_RS12670	0.22	-0.6
2,769,371	+		HGI48_RS12670	0.44	-2.6
2,769,419	+		HGI48_RS12670	0.58	-1.8
2,769,419	+		HGI48_RS12670	0.58	-1.4
2,769,420	-		HGI48_RS12670	0.58	-2.3
2,769,454	+		HGI48_RS12670	0.68	-0.5
2,769,507	-		HGI48_RS12670	0.83	-0.5
2,769,570	+				-2.8
2,769,571	-				-0.9
2,769,666	-				-1.2
2,769,666	-				-1.1
2,769,758	+				-0.3
2,769,759	-				+0.9
2,769,759	-				+0.2
2,769,762	+				+1.7
2,769,762	+				-0.1
2,769,762	+				+1.2
2,769,763	-				-0.2
2,769,763	-				+0.2
2,769,783	-				-0.2
2,769,804	-				-0.3
2,769,806	+				-1.4
2,769,817	+				+1.2
2,769,818	-				-0.7
2,769,852	+				-1.3
2,769,895	+				+0.5
2,769,896	-				+0.1
2,769,906	+				-1.6
2,769,910	+				-1.4
2,769,910	+				+0.2
2,769,942	+				+1.2
2,769,988	-				-1.2
2,770,024	+		HGI48_RS12675	0.12	+0.4
2,770,172	-		HGI48_RS12675	0.27	-2.3
2,770,172	-		HGI48_RS12675	0.27	-0.8
2,770,219	+		HGI48_RS12675	0.32	+1.2
2,770,219	+		HGI48_RS12675	0.32	+1.4
2,770,219	+		HGI48_RS12675	0.32	-0.3
2,770,219	+				+0.2
2,770,220	-		HGI48_RS12675	0.32	-0.1
2,770,246	+		HGI48_RS12675	0.35	-1.8
2,770,246	+		HGI48_RS12675	0.35	-1.3