Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11245

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,449,397	+		HGI48_RS11235	0.52	-0.7
2,449,400	+				+3.4
2,449,400	+		HGI48_RS11235	0.53	-0.5
2,449,401	-				-1.5
2,449,479	+		HGI48_RS11235	0.82	+0.3
2,449,480	-		HGI48_RS11235	0.82	-0.9
2,449,480	-		HGI48_RS11235	0.82	-0.8
2,449,480	-		HGI48_RS11235	0.82	-1.4
2,449,480	-		HGI48_RS11235	0.82	-0.2
2,449,486	-		HGI48_RS11235	0.84	-2.7
2,449,486	-		HGI48_RS11235	0.84	-0.2
2,449,513	-				+0.4
2,449,524	+				-0.7
2,449,524	+				-0.4
2,449,524	+				-0.9
2,449,524	+				+0.1
2,449,524	+				+1.1
2,449,524	+				-0.3
2,449,524	+				+0.1
2,449,525	-				-1.3
2,449,525	-				+0.1
2,449,525	-				-0.6
2,449,525	-				+0.4
2,449,582	-				-0.1
2,449,582	-				+0.1
2,449,583	+				-0.5
2,449,583	+				-0.5
2,449,583	+				-0.9
2,449,584	-				-0.7
2,449,584	-				-2.1
2,449,618	-				+0.6
2,449,625	-				+1.5
2,449,625	-				-0.7
2,449,704	-				+0.1
2,449,704	-				-1.5
2,449,745	+		HGI48_RS11240	0.11	-0.4
2,449,850	+				+2.4
2,449,931	+		HGI48_RS11240	0.38	-0.8
2,449,932	-		HGI48_RS11240	0.38	-0.0
2,449,954	+				+0.1
2,449,957	+		HGI48_RS11240	0.42	-0.5
2,450,153	+		HGI48_RS11240	0.70	+0.1
2,450,158	-		HGI48_RS11240	0.71	-1.9
2,450,282	-				+0.8
2,450,292	+		HGI48_RS11240	0.90	-0.6
2,450,292	+		HGI48_RS11240	0.90	-0.3
2,450,292	+		HGI48_RS11240	0.90	-0.3
2,450,347	+				+0.1
2,450,347	+				-0.7
2,450,347	+				+0.1
2,450,347	+				+0.3
2,450,348	-				-1.0
2,450,348	-				-0.4
2,450,348	-				-0.7
2,450,356	+				+0.1
2,450,361	+				+0.1
2,450,362	-				-1.4
2,450,362	-				+1.6
2,450,362	-				-0.2
2,450,380	-				-2.5
2,450,383	+				-0.6
2,450,384	-				+0.8
2,450,384	-				-0.7
2,450,404	+				-1.9
2,450,405	-				+0.1
2,450,405	-				-1.4
2,450,414	-				+0.1
2,450,608	-				+0.1
2,450,614	+		HGI48_RS11245	0.28	-2.7
2,450,615	-				+0.5
2,450,615	-		HGI48_RS11245	0.28	-1.2
2,450,633	+				+0.1
2,450,634	-				-0.5
2,450,634	-		HGI48_RS11245	0.31	-1.1
2,450,634	-		HGI48_RS11245	0.31	+0.3
2,450,636	-				+2.9
2,450,833	-				+0.1
2,450,848	+		HGI48_RS11245	0.57	+0.1
2,451,034	-		HGI48_RS11245	0.80	-0.2
2,451,034	-		HGI48_RS11245	0.80	-1.9
2,451,099	-		HGI48_RS11245	0.88	-0.6
2,451,099	-		HGI48_RS11245	0.88	-0.0
2,451,435	+		HGI48_RS11250	0.83	+0.1
2,451,479	+				+0.7
2,451,479	+				+0.2
2,451,479	+				-0.9
2,451,479	+				-1.9
2,451,480	-				+1.4
2,451,480	-				-1.9
2,451,480	-				+0.7
2,451,766	+		HGI48_RS11255	0.19	+0.3
2,451,766	+				+0.8
2,451,766	+		HGI48_RS11255	0.19	-1.4
2,451,766	+		HGI48_RS11255	0.19	-0.6
2,451,766	+		HGI48_RS11255	0.19	-0.4
2,451,766	+		HGI48_RS11255	0.19	+0.6
2,451,767	-		HGI48_RS11255	0.19	+1.0
2,451,767	-		HGI48_RS11255	0.19	+0.6
2,451,767	-		HGI48_RS11255	0.19	-0.1
2,451,767	-		HGI48_RS11255	0.19	-1.3
2,451,767	-		HGI48_RS11255	0.19	-2.5
2,451,768	+		HGI48_RS11255	0.19	-0.4
2,451,768	+		HGI48_RS11255	0.19	+0.1
2,452,067	+		HGI48_RS11255	0.46	-0.9
2,452,067	+		HGI48_RS11255	0.46	+0.1
2,452,068	-		HGI48_RS11255	0.46	-0.7