Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11235

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,448,311	+		HGI48_RS11230	0.32	+0.3
2,448,311	+		HGI48_RS11230	0.32	-2.3
2,448,312	-				+1.5
2,448,312	-		HGI48_RS11230	0.32	-0.9
2,448,316	-		HGI48_RS11230	0.33	-1.3
2,448,316	-		HGI48_RS11230	0.33	+1.0
2,448,316	-		HGI48_RS11230	0.33	+0.1
2,448,316	-		HGI48_RS11230	0.33	-3.3
2,448,435	+		HGI48_RS11230	0.51	-0.4
2,448,525	+		HGI48_RS11230	0.65	+0.0
2,448,555	+		HGI48_RS11230	0.69	-1.1
2,448,604	-		HGI48_RS11230	0.77	+0.5
2,448,604	-		HGI48_RS11230	0.77	-0.3
2,448,679	+		HGI48_RS11230	0.88	-0.9
2,448,723	+				+0.6
2,448,751	+				+0.6
2,448,751	+				+0.5
2,448,751	+				+0.0
2,448,751	+				+0.1
2,448,751	+				-0.5
2,448,752	-				-0.5
2,448,752	-				+0.4
2,448,752	-				+0.3
2,448,752	-				-1.3
2,448,752	-				+0.6
2,448,757	+				-0.6
2,448,757	+				+1.9
2,448,757	+				-0.4
2,448,758	-				-1.3
2,448,758	-				-0.4
2,448,758	-				+0.3
2,448,758	-				-2.3
2,448,758	-				-1.2
2,448,758	-				+1.1
2,448,886	+				-1.1
2,448,943	-				+0.8
2,448,989	+				-1.7
2,448,996	-				+0.9
2,448,998	-				+0.1
2,449,000	-				-0.5
2,449,018	+				+0.5
2,449,018	+				-0.4
2,449,019	-				+0.6
2,449,051	-				+0.6
2,449,111	-				+0.6
2,449,152	-				+0.9
2,449,199	+				-1.3
2,449,207	+				+0.5
2,449,265	+				+0.1
2,449,265	+				-0.3
2,449,265	+				+0.5
2,449,265	+				+0.9
2,449,266	-				+0.4
2,449,266	-				-0.5
2,449,397	+		HGI48_RS11235	0.52	-0.7
2,449,400	+				+3.4
2,449,400	+		HGI48_RS11235	0.53	-0.5
2,449,401	-				-1.5
2,449,479	+		HGI48_RS11235	0.82	+0.3
2,449,480	-		HGI48_RS11235	0.82	-0.9
2,449,480	-		HGI48_RS11235	0.82	-0.8
2,449,480	-		HGI48_RS11235	0.82	-1.4
2,449,480	-		HGI48_RS11235	0.82	-0.2
2,449,486	-		HGI48_RS11235	0.84	-2.7
2,449,486	-		HGI48_RS11235	0.84	-0.2
2,449,513	-				+0.4
2,449,524	+				-0.7
2,449,524	+				-0.4
2,449,524	+				-0.9
2,449,524	+				+0.1
2,449,524	+				+1.1
2,449,524	+				-0.3
2,449,524	+				+0.1
2,449,525	-				-1.3
2,449,525	-				+0.1
2,449,525	-				-0.6
2,449,525	-				+0.4
2,449,582	-				-0.1
2,449,582	-				+0.1
2,449,583	+				-0.5
2,449,583	+				-0.5
2,449,583	+				-0.9
2,449,584	-				-0.7
2,449,584	-				-2.1
2,449,618	-				+0.6
2,449,625	-				+1.5
2,449,625	-				-0.7
2,449,704	-				+0.1
2,449,704	-				-1.5
2,449,745	+		HGI48_RS11240	0.11	-0.4
2,449,850	+				+2.4
2,449,931	+		HGI48_RS11240	0.38	-0.8
2,449,932	-		HGI48_RS11240	0.38	-0.0
2,449,954	+				+0.1
2,449,957	+		HGI48_RS11240	0.42	-0.5
2,450,153	+		HGI48_RS11240	0.70	+0.1
2,450,158	-		HGI48_RS11240	0.71	-1.9
2,450,282	-				+0.8
2,450,292	+		HGI48_RS11240	0.90	-0.6
2,450,292	+		HGI48_RS11240	0.90	-0.3
2,450,292	+		HGI48_RS11240	0.90	-0.3
2,450,347	+				+0.1
2,450,347	+				-0.7
2,450,347	+				+0.1
2,450,347	+				+0.3
2,450,348	-				-1.0
2,450,348	-				-0.4
2,450,348	-				-0.7
2,450,356	+				+0.1
2,450,361	+				+0.1
2,450,362	-				-1.4
2,450,362	-				+1.6
2,450,362	-				-0.2
2,450,380	-				-2.5
2,450,383	+				-0.6
2,450,384	-				+0.8
2,450,384	-				-0.7
2,450,404	+				-1.9
2,450,405	-				+0.1
2,450,405	-				-1.4
2,450,414	-				+0.1