Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10495

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,263,398	+				-1.5
2,263,533	+		HGI48_RS10490	0.20	-1.3
2,263,534	-		HGI48_RS10490	0.20	-0.9
2,263,534	-		HGI48_RS10490	0.20	-0.2
2,263,535	+		HGI48_RS10490	0.20	-0.2
2,263,535	+		HGI48_RS10490	0.20	-1.9
2,263,619	+		HGI48_RS10490	0.30	+0.5
2,263,809	+				+0.1
2,263,885	-		HGI48_RS10490	0.60	-0.9
2,263,904	+		HGI48_RS10490	0.62	-2.7
2,263,904	+		HGI48_RS10490	0.62	-2.2
2,263,904	+				+1.4
2,263,905	-				+0.5
2,263,909	+		HGI48_RS10490	0.63	+1.1
2,263,909	+		HGI48_RS10490	0.63	-0.3
2,263,909	+		HGI48_RS10490	0.63	-1.9
2,263,910	-		HGI48_RS10490	0.63	-0.9
2,263,910	-		HGI48_RS10490	0.63	-0.5
2,264,082	+		HGI48_RS10490	0.83	-2.1
2,264,087	-		HGI48_RS10490	0.83	-1.7
2,264,094	+				+0.1
2,264,094	+		HGI48_RS10490	0.84	-2.9
2,264,107	-		HGI48_RS10490	0.86	-1.9
2,264,239	+				+0.5
2,264,239	+				-0.6
2,264,295	-				+0.7
2,264,318	+				-0.2
2,264,318	+				-0.2
2,264,318	+				-0.1
2,264,319	-				+0.4
2,264,337	+				+0.4
2,264,337	+				-0.6
2,264,338	-				+1.1
2,264,339	+				+0.1
2,264,339	+				-0.6
2,264,340	-				-0.9
2,264,340	-				-0.3
2,264,460	-				-1.5
2,264,553	+		HGI48_RS10495	0.37	-1.2
2,264,554	-				+0.8
2,264,554	-		HGI48_RS10495	0.37	-0.4
2,264,554	-		HGI48_RS10495	0.37	-0.3
2,264,554	-		HGI48_RS10495	0.37	-0.3
2,264,554	-		HGI48_RS10495	0.37	-0.3
2,264,559	+		HGI48_RS10495	0.38	-0.6
2,264,559	+		HGI48_RS10495	0.38	+0.1
2,264,559	+				+1.1
2,264,559	+		HGI48_RS10495	0.38	-1.3
2,264,559	+		HGI48_RS10495	0.38	+0.7
2,264,560	-		HGI48_RS10495	0.38	+0.4
2,264,560	-				+1.7
2,264,560	-		HGI48_RS10495	0.38	-0.1
2,264,560	-		HGI48_RS10495	0.38	-1.6
2,264,560	-		HGI48_RS10495	0.38	-0.3
2,264,560	-		HGI48_RS10495	0.38	-0.2
2,264,560	-		HGI48_RS10495	0.38	-0.2
2,264,560	-		HGI48_RS10495	0.38	-0.3
2,264,594	+		HGI48_RS10495	0.44	-1.1
2,264,595	-		HGI48_RS10495	0.44	+1.1
2,264,595	-		HGI48_RS10495	0.44	+1.3
2,264,595	-		HGI48_RS10495	0.44	+0.3
2,264,595	-		HGI48_RS10495	0.44	+1.1
2,264,610	+		HGI48_RS10495	0.46	-1.9
2,264,619	-		HGI48_RS10495	0.48	+0.7
2,264,619	-		HGI48_RS10495	0.48	-0.3
2,264,624	+		HGI48_RS10495	0.49	-0.4
2,264,625	-		HGI48_RS10495	0.49	-0.2
2,264,625	-		HGI48_RS10495	0.49	-0.2
2,264,625	-		HGI48_RS10495	0.49	-0.9
2,264,741	-		HGI48_RS10495	0.67	-1.0
2,264,977	+				+1.9
2,265,002	+				-0.6
2,265,003	-				+0.7
2,265,003	-				+0.1
2,265,003	-				+0.3
2,265,012	-				+0.2
2,265,023	+				+0.7
2,265,023	+				-0.3
2,265,198	+				-1.1
2,265,198	+				-0.4
2,265,199	-				+1.1
2,265,346	+		HGI48_RS10500	0.24	+0.2
2,265,346	+		HGI48_RS10500	0.24	-0.9
2,265,346	+		HGI48_RS10500	0.24	-1.3
2,265,347	-		HGI48_RS10500	0.24	-0.4
2,265,347	-		HGI48_RS10500	0.24	-2.5
2,265,347	-		HGI48_RS10500	0.24	-1.1
2,265,347	-		HGI48_RS10500	0.24	+0.2
2,265,347	-		HGI48_RS10500	0.24	-1.8
2,265,350	-		HGI48_RS10500	0.24	-0.3
2,265,433	+		HGI48_RS10500	0.34	+0.4
2,265,469	-		HGI48_RS10500	0.38	-0.2
2,265,490	-		HGI48_RS10500	0.40	-2.5
2,265,490	-		HGI48_RS10500	0.40	-1.3
2,265,550	+		HGI48_RS10500	0.47	-1.9
2,265,682	+		HGI48_RS10500	0.62	-0.9
2,265,682	+		HGI48_RS10500	0.62	-1.2
2,265,683	-		HGI48_RS10500	0.62	-0.9
2,265,683	-		HGI48_RS10500	0.62	-2.2
2,265,847	+		HGI48_RS10500	0.80	-1.7