Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10340

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,229,004	-				-0.6
2,229,004	-				+0.7
2,229,023	+				+0.7
2,229,023	+				-0.0
2,229,059	-				+0.4
2,229,084	+				-0.4
2,229,084	+				-0.6
2,229,084	+				+0.9
2,229,084	+				-0.9
2,229,085	-				+0.1
2,229,129	-				+0.8
2,229,194	+		HGI48_RS10335	0.15	-3.1
2,229,194	+		HGI48_RS10335	0.15	-0.1
2,229,195	-		HGI48_RS10335	0.15	+0.1
2,229,195	-		HGI48_RS10335	0.15	+0.3
2,229,195	-		HGI48_RS10335	0.15	+0.7
2,229,195	-		HGI48_RS10335	0.15	+0.6
2,229,195	-		HGI48_RS10335	0.15	+0.6
2,229,260	+		HGI48_RS10335	0.22	+0.7
2,229,299	+		HGI48_RS10335	0.27	+0.2
2,229,299	+		HGI48_RS10335	0.27	-1.1
2,229,299	+		HGI48_RS10335	0.27	-1.9
2,229,410	+		HGI48_RS10335	0.40	-1.7
2,229,410	+		HGI48_RS10335	0.40	+0.3
2,229,410	+		HGI48_RS10335	0.40	-0.2
2,229,411	-		HGI48_RS10335	0.40	-0.4
2,229,428	+		HGI48_RS10335	0.42	-0.6
2,229,428	+		HGI48_RS10335	0.42	+0.4
2,229,429	-		HGI48_RS10335	0.42	-0.2
2,229,440	+				-1.5
2,229,440	+		HGI48_RS10335	0.43	-0.5
2,229,440	+		HGI48_RS10335	0.43	-2.2
2,229,440	+		HGI48_RS10335	0.43	+0.6
2,229,441	-		HGI48_RS10335	0.44	+0.7
2,229,816	+				-0.5
2,229,834	-		HGI48_RS10335	0.90	+1.2
2,229,946	+				-1.5
2,229,946	+				+0.8
2,229,946	+				-0.3
2,229,992	+				-0.3
2,229,992	+				-0.3
2,229,993	-				-0.5
2,230,002	-				+1.1
2,230,088	+		HGI48_RS10340	0.19	+0.3
2,230,088	+				-1.5
2,230,088	+		HGI48_RS10340	0.19	-1.9
2,230,088	+		HGI48_RS10340	0.19	-0.2
2,230,088	+		HGI48_RS10340	0.19	+1.2
2,230,088	+		HGI48_RS10340	0.19	-0.5
2,230,088	+		HGI48_RS10340	0.19	+1.1
2,230,089	-		HGI48_RS10340	0.19	-1.2
2,230,089	-		HGI48_RS10340	0.19	+0.2
2,230,089	-		HGI48_RS10340	0.19	+0.8
2,230,091	+		HGI48_RS10340	0.19	-0.2
2,230,091	+		HGI48_RS10340	0.19	+0.3
2,230,091	+		HGI48_RS10340	0.19	+0.9
2,230,092	-		HGI48_RS10340	0.20	+0.5
2,230,092	-		HGI48_RS10340	0.20	-1.4
2,230,190	+		HGI48_RS10340	0.41	-0.3
2,230,191	-		HGI48_RS10340	0.41	-1.9
2,230,235	-		HGI48_RS10340	0.50	-1.2
2,230,396	-		HGI48_RS10340	0.85	+0.2
2,230,470	+				-1.9
2,230,470	+				+0.1
2,230,493	-				-0.5
2,230,502	+				+0.1
2,230,502	+				+0.1
2,230,503	-				-1.9
2,230,532	+				-0.3
2,230,532	+				+0.3
2,230,533	-				-0.0
2,230,563	+				+0.6
2,230,580	+				+0.1
2,230,581	-				+0.1
2,230,584	+				-0.9
2,230,584	+				-0.5
2,230,584	+				-0.7
2,230,584	+				-0.3
2,230,584	+				-1.9
2,230,584	+				+0.1
2,230,585	-				+1.1
2,230,585	-				+0.1
2,230,585	-				-1.1
2,230,585	-				-2.2
2,230,603	-				+0.1
2,230,607	+				+0.1
2,230,607	+				-0.4
2,230,607	+				+1.3
2,230,608	-				-0.1
2,230,654	+				+0.4
2,230,655	-				+0.9
2,230,671	+				-0.3
2,230,671	+				-0.4
2,230,672	-				+0.8
2,230,672	-				+0.7
2,230,672	-				-0.3
2,230,672	-				-0.2
2,230,672	-				+0.1
2,230,672	-				-0.1
2,230,688	+				-0.2
2,230,826	-		HGI48_RS10345	0.16	-2.5
2,230,955	+				+1.9
2,230,955	+		HGI48_RS10345	0.31	+0.5
2,230,955	+		HGI48_RS10345	0.31	-1.3
2,230,956	-				+0.1
2,230,956	-		HGI48_RS10345	0.31	-2.5
2,230,956	-		HGI48_RS10345	0.31	-1.2
2,230,967	+		HGI48_RS10345	0.32	+0.5
2,230,968	-		HGI48_RS10345	0.32	+0.4
2,230,971	+		HGI48_RS10345	0.32	-1.9
2,230,971	+		HGI48_RS10345	0.32	-0.2
2,230,980	+		HGI48_RS10345	0.33	-0.2
2,230,980	+		HGI48_RS10345	0.33	-1.5
2,230,980	+		HGI48_RS10345	0.33	-1.5
2,230,981	-		HGI48_RS10345	0.34	+1.4
2,230,981	-		HGI48_RS10345	0.34	-0.3
2,231,002	+		HGI48_RS10345	0.36	-0.5
2,231,063	+		HGI48_RS10345	0.43	-0.2
2,231,064	-		HGI48_RS10345	0.43	-1.1
2,231,129	-		HGI48_RS10345	0.50	+0.1
2,231,244	+		HGI48_RS10345	0.63	-0.4
2,231,244	+		HGI48_RS10345	0.63	-0.6
2,231,244	+		HGI48_RS10345	0.63	-0.2
2,231,245	-		HGI48_RS10345	0.63	-1.1
2,231,245	-		HGI48_RS10345	0.63	-0.4
2,231,245	-		HGI48_RS10345	0.63	-0.9
2,231,245	-		HGI48_RS10345	0.63	-0.6
2,231,245	-		HGI48_RS10345	0.63	-0.3
2,231,390	+		HGI48_RS10345	0.79	-0.4
2,231,390	+		HGI48_RS10345	0.79	-1.6
2,231,396	+		HGI48_RS10345	0.80	-2.1
2,231,396	+		HGI48_RS10345	0.80	+0.4
2,231,447	+		HGI48_RS10345	0.85	+0.7
2,231,447	+		HGI48_RS10345	0.85	-0.3
2,231,447	+		HGI48_RS10345	0.85	-0.6
2,231,447	+		HGI48_RS10345	0.85	+1.0
2,231,447	+				-1.5
2,231,448	-		HGI48_RS10345	0.85	-0.2