Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10335

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,228,109	+		HGI48_RS10325	0.17	-0.9
2,228,143	-		HGI48_RS10325	0.23	-0.1
2,228,159	-		HGI48_RS10325	0.25	-1.2
2,228,188	+		HGI48_RS10325	0.30	-1.7
2,228,189	-		HGI48_RS10325	0.30	-1.7
2,228,189	-		HGI48_RS10325	0.30	+0.4
2,228,189	-		HGI48_RS10325	0.30	-0.4
2,228,189	-		HGI48_RS10325	0.30	+0.2
2,228,189	-		HGI48_RS10325	0.30	-0.4
2,228,190	+		HGI48_RS10325	0.30	-0.0
2,228,190	+		HGI48_RS10325	0.30	-2.9
2,228,190	+				-1.5
2,228,190	+		HGI48_RS10325	0.30	+0.4
2,228,191	-		HGI48_RS10325	0.30	-1.2
2,228,191	-		HGI48_RS10325	0.30	-0.3
2,228,191	-		HGI48_RS10325	0.30	-1.5
2,228,194	+		HGI48_RS10325	0.31	-0.5
2,228,194	+		HGI48_RS10325	0.31	+0.3
2,228,195	-		HGI48_RS10325	0.31	+0.9
2,228,200	-		HGI48_RS10325	0.32	-0.5
2,228,298	+				+1.9
2,228,298	+		HGI48_RS10325	0.48	-1.4
2,228,298	+		HGI48_RS10325	0.48	-3.1
2,228,298	+		HGI48_RS10325	0.48	+1.0
2,228,299	-		HGI48_RS10325	0.48	-0.3
2,228,299	-		HGI48_RS10325	0.48	-0.3
2,228,368	-		HGI48_RS10325	0.59	+0.5
2,228,401	-		HGI48_RS10325	0.64	+0.6
2,228,443	+		HGI48_RS10325	0.71	-2.5
2,228,444	-		HGI48_RS10325	0.71	+0.4
2,228,444	-		HGI48_RS10325	0.71	-0.3
2,228,444	-		HGI48_RS10325	0.71	+0.1
2,228,476	+		HGI48_RS10325	0.76	-0.6
2,228,476	+				+2.3
2,228,477	-		HGI48_RS10325	0.76	-0.2
2,228,513	+		HGI48_RS10325	0.82	-1.0
2,228,514	-		HGI48_RS10325	0.82	-0.3
2,228,596	+				-1.3
2,228,596	+				+0.1
2,228,596	+				-2.5
2,228,596	+				+0.1
2,228,596	+				-2.2
2,228,597	-				-0.5
2,228,597	-				+1.0
2,228,597	-				-0.7
2,228,597	-				-0.6
2,228,597	-				+0.9
2,228,597	-				-0.1
2,228,597	-				-0.0
2,228,599	-				-0.9
2,228,599	-				+0.1
2,228,599	-				-0.0
2,228,599	-				+0.1
2,228,599	-				+0.4
2,228,620	+				-0.6
2,228,641	-				+0.7
2,228,864	+				+1.1
2,228,941	+				-0.1
2,228,941	+				-0.6
2,228,942	-				+0.5
2,229,004	-				-0.6
2,229,004	-				+0.7
2,229,023	+				+0.7
2,229,023	+				-0.0
2,229,059	-				+0.4
2,229,084	+				-0.4
2,229,084	+				-0.6
2,229,084	+				+0.9
2,229,084	+				-0.9
2,229,085	-				+0.1
2,229,129	-				+0.8
2,229,194	+		HGI48_RS10335	0.15	-3.1
2,229,194	+		HGI48_RS10335	0.15	-0.1
2,229,195	-		HGI48_RS10335	0.15	+0.1
2,229,195	-		HGI48_RS10335	0.15	+0.3
2,229,195	-		HGI48_RS10335	0.15	+0.7
2,229,195	-		HGI48_RS10335	0.15	+0.6
2,229,195	-		HGI48_RS10335	0.15	+0.6
2,229,260	+		HGI48_RS10335	0.22	+0.7
2,229,299	+		HGI48_RS10335	0.27	+0.2
2,229,299	+		HGI48_RS10335	0.27	-1.1
2,229,299	+		HGI48_RS10335	0.27	-1.9
2,229,410	+		HGI48_RS10335	0.40	-1.7
2,229,410	+		HGI48_RS10335	0.40	+0.3
2,229,410	+		HGI48_RS10335	0.40	-0.2
2,229,411	-		HGI48_RS10335	0.40	-0.4
2,229,428	+		HGI48_RS10335	0.42	-0.6
2,229,428	+		HGI48_RS10335	0.42	+0.4
2,229,429	-		HGI48_RS10335	0.42	-0.2
2,229,440	+				-1.5
2,229,440	+		HGI48_RS10335	0.43	-0.5
2,229,440	+		HGI48_RS10335	0.43	-2.2
2,229,440	+		HGI48_RS10335	0.43	+0.6
2,229,441	-		HGI48_RS10335	0.44	+0.7
2,229,816	+				-0.5
2,229,834	-		HGI48_RS10335	0.90	+1.2
2,229,946	+				-1.5
2,229,946	+				+0.8
2,229,946	+				-0.3
2,229,992	+				-0.3
2,229,992	+				-0.3
2,229,993	-				-0.5
2,230,002	-				+1.1
2,230,088	+		HGI48_RS10340	0.19	+0.3
2,230,088	+				-1.5
2,230,088	+		HGI48_RS10340	0.19	-1.9
2,230,088	+		HGI48_RS10340	0.19	-0.2
2,230,088	+		HGI48_RS10340	0.19	+1.2
2,230,088	+		HGI48_RS10340	0.19	-0.5
2,230,088	+		HGI48_RS10340	0.19	+1.1
2,230,089	-		HGI48_RS10340	0.19	-1.2
2,230,089	-		HGI48_RS10340	0.19	+0.2
2,230,089	-		HGI48_RS10340	0.19	+0.8
2,230,091	+		HGI48_RS10340	0.19	-0.2
2,230,091	+		HGI48_RS10340	0.19	+0.3
2,230,091	+		HGI48_RS10340	0.19	+0.9
2,230,092	-		HGI48_RS10340	0.20	+0.5
2,230,092	-		HGI48_RS10340	0.20	-1.4
2,230,190	+		HGI48_RS10340	0.41	-0.3
2,230,191	-		HGI48_RS10340	0.41	-1.9
2,230,235	-		HGI48_RS10340	0.50	-1.2
2,230,396	-		HGI48_RS10340	0.85	+0.2
2,230,470	+				-1.9
2,230,470	+				+0.1
2,230,493	-				-0.5
2,230,502	+				+0.1
2,230,502	+				+0.1
2,230,503	-				-1.9
2,230,532	+				-0.3
2,230,532	+				+0.3
2,230,533	-				-0.0
2,230,563	+				+0.6
2,230,580	+				+0.1
2,230,581	-				+0.1
2,230,584	+				-0.9
2,230,584	+				-0.5
2,230,584	+				-0.7
2,230,584	+				-0.3
2,230,584	+				-1.9
2,230,584	+				+0.1
2,230,585	-				+1.1
2,230,585	-				+0.1
2,230,585	-				-1.1
2,230,585	-				-2.2
2,230,603	-				+0.1
2,230,607	+				+0.1
2,230,607	+				-0.4
2,230,607	+				+1.3
2,230,608	-				-0.1
2,230,654	+				+0.4
2,230,655	-				+0.9
2,230,671	+				-0.3
2,230,671	+				-0.4
2,230,672	-				+0.8
2,230,672	-				+0.7
2,230,672	-				-0.3
2,230,672	-				-0.2
2,230,672	-				+0.1
2,230,672	-				-0.1
2,230,688	+				-0.2
2,230,826	-		HGI48_RS10345	0.16	-2.5