Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10305

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,222,868	+		HGI48_RS10300	0.62	-1.6
2,222,868	+		HGI48_RS10300	0.62	-1.3
2,222,869	-		HGI48_RS10300	0.62	-0.9
2,222,961	+		HGI48_RS10300	0.67	+0.4
2,223,018	+		HGI48_RS10300	0.70	-0.7
2,223,019	-		HGI48_RS10300	0.70	-0.0
2,223,019	-		HGI48_RS10300	0.70	-0.9
2,223,019	-		HGI48_RS10300	0.70	+0.7
2,223,019	-		HGI48_RS10300	0.70	-0.2
2,223,022	-		HGI48_RS10300	0.70	-0.4
2,223,076	-		HGI48_RS10300	0.73	-1.5
2,223,102	+		HGI48_RS10300	0.74	-1.5
2,223,102	+		HGI48_RS10300	0.74	-0.0
2,223,102	+		HGI48_RS10300	0.74	-1.9
2,223,102	+		HGI48_RS10300	0.74	-0.6
2,223,103	-		HGI48_RS10300	0.74	-0.2
2,223,103	-		HGI48_RS10300	0.74	+0.1
2,223,103	-		HGI48_RS10300	0.74	-0.5
2,223,103	-		HGI48_RS10300	0.74	-0.1
2,223,103	-		HGI48_RS10300	0.74	+0.1
2,223,103	-		HGI48_RS10300	0.74	-1.5
2,223,105	+		HGI48_RS10300	0.74	-0.0
2,223,105	+		HGI48_RS10300	0.74	-0.3
2,223,105	+		HGI48_RS10300	0.74	+0.5
2,223,106	-		HGI48_RS10300	0.74	-2.2
2,223,106	-		HGI48_RS10300	0.74	+1.4
2,223,186	+		HGI48_RS10300	0.79	+0.7
2,223,186	+		HGI48_RS10300	0.79	-0.9
2,223,187	-		HGI48_RS10300	0.79	-1.0
2,223,187	-		HGI48_RS10300	0.79	+0.1
2,223,187	-		HGI48_RS10300	0.79	+0.9
2,223,187	-		HGI48_RS10300	0.79	+0.2
2,223,187	-		HGI48_RS10300	0.79	-1.3
2,223,286	+		HGI48_RS10300	0.84	-0.2
2,223,396	-				+1.6
2,223,444	-				+0.4
2,223,451	+				-0.6
2,223,453	+				-0.6
2,223,454	-				-0.3
2,223,454	-				-0.6
2,223,454	-				+0.4
2,223,546	-				+0.8
2,223,606	+				-0.0
2,223,695	-				+0.1
2,223,755	-				-1.2
2,223,774	-				+0.8
2,223,991	-		HGI48_RS10305	0.27	-2.2
2,224,143	+		HGI48_RS10305	0.54	+0.3
2,224,318	+		HGI48_RS10305	0.86	-0.0
2,224,318	+		HGI48_RS10305	0.86	-0.8
2,224,319	-		HGI48_RS10305	0.86	-0.1
2,224,338	+		HGI48_RS10305	0.89	+0.3
2,224,368	+				-0.3
2,224,388	-				+0.3
2,224,388	-				-0.3
2,224,388	-				+0.1
2,224,388	-				+0.4
2,224,394	-				+0.8
2,224,403	-				+0.1
2,224,567	-				-0.9
2,224,639	+				-0.9
2,224,640	-				+1.4
2,224,640	-				-0.9
2,224,809	-		HGI48_RS10310	0.17	+1.3
2,224,831	+		HGI48_RS10310	0.18	+0.0
2,225,017	+		HGI48_RS10310	0.28	-0.6
2,225,017	+		HGI48_RS10310	0.28	+0.3
2,225,018	-				+0.1
2,225,018	-		HGI48_RS10310	0.28	+0.9
2,225,018	-		HGI48_RS10310	0.28	+0.1
2,225,019	+		HGI48_RS10310	0.28	+0.4
2,225,019	+		HGI48_RS10310	0.28	-0.7
2,225,019	+		HGI48_RS10310	0.28	+0.6
2,225,020	-		HGI48_RS10310	0.28	-1.1
2,225,314	+		HGI48_RS10310	0.43	-0.7
2,225,315	-		HGI48_RS10310	0.43	+0.4
2,225,316	+		HGI48_RS10310	0.43	-0.5
2,225,317	-		HGI48_RS10310	0.43	-0.9
2,225,317	-				+0.1
2,225,317	-		HGI48_RS10310	0.43	+0.5
2,225,323	-		HGI48_RS10310	0.44	-2.2