Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10100

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,179,003	-				-0.2
2,179,003	-				-1.5
2,179,003	-				+0.1
2,179,108	+				+0.1
2,179,108	+				+0.1
2,179,111	+				-0.2
2,179,111	+				+1.5
2,179,112	-				-1.2
2,179,355	+		HGI48_RS10095	0.35	+0.4
2,179,355	+		HGI48_RS10095	0.35	-0.5
2,179,490	+		HGI48_RS10095	0.53	+0.2
2,179,490	+		HGI48_RS10095	0.53	-0.0
2,179,543	+		HGI48_RS10095	0.60	+0.7
2,179,543	+		HGI48_RS10095	0.60	+1.3
2,179,592	+		HGI48_RS10095	0.67	+0.5
2,179,838	+				+0.9
2,179,838	+				-1.5
2,179,886	+				-1.9
2,179,963	-		HGI48_RS10100	0.16	-0.9
2,180,046	-		HGI48_RS10100	0.32	-0.2
2,180,412	+				+1.0
2,180,458	+				-0.2
2,180,459	-				+0.1
2,180,562	-				-1.1
2,180,574	+				+0.5
2,180,574	+				+0.1
2,180,613	+				+1.0
2,180,663	+				+0.1
2,180,663	+				+0.7
2,180,671	+				+0.1
2,180,671	+				-2.5
2,180,671	+				+1.1
2,180,671	+				-1.7
2,180,671	+				+0.3
2,180,672	-				-0.1
2,180,672	-				-1.2
2,180,672	-				+0.3
2,180,701	+				+0.5
2,180,701	+				-0.6
2,180,701	+				-0.7
2,180,748	+				-1.1
2,180,748	+				-0.5
2,180,748	+				-0.4
2,180,749	-				+0.6
2,180,857	+		HGI48_RS10105	0.17	-1.0
2,180,866	+		HGI48_RS10105	0.18	+0.7
2,180,885	-		HGI48_RS10105	0.20	-1.2
2,180,997	+				-0.9
2,181,131	-		HGI48_RS10105	0.44	+0.1
2,181,208	+		HGI48_RS10105	0.51	-0.8
2,181,209	-				-1.5
2,181,242	+		HGI48_RS10105	0.55	-0.7
2,181,242	+		HGI48_RS10105	0.55	+0.5
2,181,242	+		HGI48_RS10105	0.55	-0.2
2,181,242	+		HGI48_RS10105	0.55	+0.1
2,181,242	+				-0.5
2,181,243	-				+0.1
2,181,243	-				-1.5
2,181,243	-		HGI48_RS10105	0.55	-0.6
2,181,243	-		HGI48_RS10105	0.55	-0.5
2,181,243	-		HGI48_RS10105	0.55	-1.0
2,181,243	-		HGI48_RS10105	0.55	+0.7
2,181,243	-		HGI48_RS10105	0.55	+0.1
2,181,243	-				+0.1
2,181,243	-		HGI48_RS10105	0.55	-0.3
2,181,297	+		HGI48_RS10105	0.60	+0.1
2,181,338	-		HGI48_RS10105	0.64	-0.5
2,181,338	-		HGI48_RS10105	0.64	-1.2
2,181,338	-		HGI48_RS10105	0.64	+0.5
2,181,338	-		HGI48_RS10105	0.64	+1.1
2,181,338	-		HGI48_RS10105	0.64	-0.9
2,181,338	-		HGI48_RS10105	0.64	+0.6
2,181,371	-		HGI48_RS10105	0.67	+0.1