Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10060

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,172,008	+		HGI48_RS10055	0.28	-0.5
2,172,009	-		HGI48_RS10055	0.28	+0.5
2,172,021	+		HGI48_RS10055	0.30	-0.7
2,172,021	+		HGI48_RS10055	0.30	+0.0
2,172,021	+		HGI48_RS10055	0.30	-0.4
2,172,021	+		HGI48_RS10055	0.30	-0.1
2,172,022	-		HGI48_RS10055	0.30	+0.6
2,172,022	-		HGI48_RS10055	0.30	-1.5
2,172,093	-				+2.9
2,172,266	-		HGI48_RS10055	0.62	+0.8
2,172,284	+		HGI48_RS10055	0.64	-0.4
2,172,284	+		HGI48_RS10055	0.64	-2.5
2,172,285	-		HGI48_RS10055	0.64	-1.5
2,172,285	-				-1.5
2,172,285	-		HGI48_RS10055	0.64	+0.1
2,172,305	+				+1.9
2,172,305	+		HGI48_RS10055	0.67	-0.1
2,172,306	-				+0.1
2,172,306	-		HGI48_RS10055	0.67	+0.4
2,172,308	+		HGI48_RS10055	0.67	-0.0
2,172,308	+		HGI48_RS10055	0.67	-0.0
2,172,308	+		HGI48_RS10055	0.67	+0.4
2,172,308	+		HGI48_RS10055	0.67	-1.9
2,172,309	-		HGI48_RS10055	0.67	+1.1
2,172,309	-		HGI48_RS10055	0.67	-0.3
2,172,309	-		HGI48_RS10055	0.67	-1.7
2,172,309	-		HGI48_RS10055	0.67	-0.5
2,172,311	+		HGI48_RS10055	0.68	-0.1
2,172,474	+		HGI48_RS10055	0.89	-0.9
2,172,474	+		HGI48_RS10055	0.89	-0.5
2,172,474	+				+1.1
2,172,474	+				-0.5
2,172,474	+		HGI48_RS10055	0.89	-0.1
2,172,474	+		HGI48_RS10055	0.89	-0.9
2,172,475	-		HGI48_RS10055	0.89	+0.1
2,172,475	-		HGI48_RS10055	0.89	-0.5
2,172,556	-				+0.5
2,172,706	+				-1.7
2,172,706	+				-1.7
2,172,707	-				+0.1
2,172,707	-				+0.4
2,172,715	-				+0.3
2,172,755	+				-0.3
2,172,755	+				-1.2
2,172,755	+				-0.9
2,172,755	+				-1.5
2,172,756	-				-0.8
2,172,756	-				+0.1
2,172,813	+				+0.6
2,172,822	-				+3.3
2,172,983	+		HGI48_RS10060	0.45	-0.7
2,172,984	-		HGI48_RS10060	0.46	+0.1
2,172,984	-		HGI48_RS10060	0.46	+0.3
2,172,984	-		HGI48_RS10060	0.46	-0.9
2,172,984	-		HGI48_RS10060	0.46	-2.2
2,173,048	+				-1.5
2,173,153	-				+1.0
2,173,153	-				+0.0
2,173,162	-				+1.3
2,173,617	-		HGI48_RS10065	0.38	-0.6
2,173,724	-		HGI48_RS10065	0.49	-1.2
2,173,863	+		HGI48_RS10065	0.64	+0.3
2,173,925	+		HGI48_RS10065	0.70	-1.1
2,173,925	+		HGI48_RS10065	0.70	-0.9
2,174,110	+		HGI48_RS10065	0.89	-0.1
2,174,110	+		HGI48_RS10065	0.89	-0.2
2,174,110	+		HGI48_RS10065	0.89	+0.1