Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10045

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,167,546	-				+0.6
2,167,752	+		HGI48_RS10040	0.20	+0.2
2,167,753	-		HGI48_RS10040	0.20	+0.5
2,167,773	+				+0.1
2,167,773	+		HGI48_RS10040	0.22	-0.2
2,167,773	+		HGI48_RS10040	0.22	+0.1
2,167,773	+		HGI48_RS10040	0.22	-0.1
2,167,774	-		HGI48_RS10040	0.22	-0.2
2,167,779	-		HGI48_RS10040	0.23	+0.4
2,167,827	+		HGI48_RS10040	0.28	+0.5
2,167,827	+		HGI48_RS10040	0.28	+0.1
2,167,900	+		HGI48_RS10040	0.35	+0.7
2,167,901	-				+0.9
2,167,927	+				+0.6
2,167,927	+				+1.4
2,167,928	-		HGI48_RS10040	0.38	-0.3
2,167,928	-		HGI48_RS10040	0.38	+0.4
2,167,953	+		HGI48_RS10040	0.41	-1.7
2,167,953	+		HGI48_RS10040	0.41	-2.4
2,168,019	+		HGI48_RS10040	0.48	+0.5
2,168,090	+		HGI48_RS10040	0.55	+0.6
2,168,091	-		HGI48_RS10040	0.55	-0.9
2,168,091	-				+1.9
2,168,160	-		HGI48_RS10040	0.62	-1.9
2,168,206	+		HGI48_RS10040	0.67	-0.1
2,168,268	+		HGI48_RS10040	0.74	+0.6
2,168,269	-		HGI48_RS10040	0.74	-2.4
2,168,269	-		HGI48_RS10040	0.74	+0.0
2,168,356	+		HGI48_RS10040	0.83	-0.6
2,168,356	+				-0.4
2,168,356	+		HGI48_RS10040	0.83	-0.2
2,168,356	+		HGI48_RS10040	0.83	+1.4
2,168,357	-		HGI48_RS10040	0.83	-0.4
2,168,357	-		HGI48_RS10040	0.83	-0.9
2,168,357	-		HGI48_RS10040	0.83	-0.7
2,168,357	-		HGI48_RS10040	0.83	+0.3
2,168,542	+				-2.4
2,168,542	+				-0.8
2,168,543	-				+0.9
2,168,894	+		HGI48_RS10045	0.20	-1.0
2,170,410	+				-0.6
2,170,411	-				+0.2
2,170,411	-				+1.4
2,170,411	-				+0.5
2,170,469	+				-0.9
2,170,470	-				-1.5
2,170,488	-				-0.4
2,170,529	-				+0.2
2,170,536	+				+1.2
2,170,588	+				-0.2
2,170,589	-				+0.3
2,170,593	+				+1.1
2,170,603	+				+0.1
2,170,617	+				+0.1
2,170,617	+				+0.7
2,170,637	-				-1.5
2,170,764	+				-1.8
2,170,797	+				+0.3
2,170,845	+				-0.0
2,170,949	-				-1.3
2,170,972	+				+0.1
2,171,126	+		HGI48_RS10050	0.27	-1.1
2,171,183	+		HGI48_RS10050	0.36	-1.9
2,171,183	+				+0.1