Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09825

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,121,035	+				+0.9
2,121,035	+				+1.1
2,121,035	+		HGI48_RS09820	0.45	-0.9
2,121,035	+		HGI48_RS09820	0.45	+1.3
2,121,035	+		HGI48_RS09820	0.45	+0.1
2,121,036	-		HGI48_RS09820	0.46	-0.1
2,121,036	-				+2.3
2,121,036	-		HGI48_RS09820	0.46	-1.4
2,121,036	-		HGI48_RS09820	0.46	-1.7
2,121,038	+				+1.5
2,121,038	+		HGI48_RS09820	0.46	+0.4
2,121,038	+		HGI48_RS09820	0.46	-1.2
2,121,038	+		HGI48_RS09820	0.46	-1.2
2,121,038	+		HGI48_RS09820	0.46	-0.3
2,121,039	-		HGI48_RS09820	0.46	+0.9
2,121,039	-		HGI48_RS09820	0.46	+0.1
2,121,039	-		HGI48_RS09820	0.46	-0.4
2,121,039	-				-1.4
2,121,039	-		HGI48_RS09820	0.46	+0.3
2,121,041	-		HGI48_RS09820	0.46	-0.7
2,121,108	+				-0.9
2,121,170	+		HGI48_RS09820	0.63	+0.3
2,121,170	+		HGI48_RS09820	0.63	-1.0
2,121,171	-				+0.1
2,121,171	-		HGI48_RS09820	0.63	+0.4
2,121,171	-				+1.7
2,121,171	-		HGI48_RS09820	0.63	-0.3
2,121,235	-				+2.0
2,121,235	-		HGI48_RS09820	0.72	-2.7
2,121,301	+		HGI48_RS09820	0.81	-1.2
2,121,301	+		HGI48_RS09820	0.81	+0.1
2,121,301	+		HGI48_RS09820	0.81	+0.7
2,121,361	-		HGI48_RS09820	0.89	-0.6
2,121,361	-				-1.4
2,121,384	+				-0.6
2,121,384	+				-0.3
2,121,497	+				-0.6
2,121,498	-				-0.0
2,121,498	-				-0.3
2,121,539	+				-0.5
2,121,540	-				+0.4
2,121,540	-				+1.0
2,121,566	-				+0.6
2,121,599	-				-0.4
2,121,605	-				+1.2
2,121,605	-				+0.1
2,121,612	+				-2.7
2,121,654	+				+0.1
2,121,655	-				-0.4
2,121,686	+				+0.1
2,121,686	+				+1.5
2,121,696	+				+0.7
2,121,696	+				+0.8
2,121,697	-				+0.1
2,121,697	-				+0.6
2,121,697	-				+1.1
2,121,697	-				+0.7
2,121,769	-				-0.9
2,121,957	-				-1.4
2,121,957	-				+0.7
2,121,992	+				-0.2
2,122,035	+				-1.4
2,122,062	-				+0.7
2,122,194	+		HGI48_RS09825	0.18	-0.6
2,122,194	+		HGI48_RS09825	0.18	+0.4
2,122,194	+		HGI48_RS09825	0.18	+0.2
2,122,194	+		HGI48_RS09825	0.18	-0.4
2,122,194	+		HGI48_RS09825	0.18	+0.7
2,122,194	+		HGI48_RS09825	0.18	+1.3
2,122,195	-		HGI48_RS09825	0.18	+0.4
2,122,195	-		HGI48_RS09825	0.18	-1.9
2,122,196	+		HGI48_RS09825	0.19	+0.1
2,122,196	+		HGI48_RS09825	0.19	-1.9
2,122,196	+		HGI48_RS09825	0.19	+0.8
2,122,196	+		HGI48_RS09825	0.19	-0.6
2,122,197	-		HGI48_RS09825	0.19	+0.2
2,122,197	-		HGI48_RS09825	0.19	-1.0
2,122,197	-		HGI48_RS09825	0.19	-0.9
2,122,200	+		HGI48_RS09825	0.19	-0.0
2,122,200	+		HGI48_RS09825	0.19	-0.0
2,122,201	-		HGI48_RS09825	0.19	-2.0
2,122,201	-		HGI48_RS09825	0.19	-0.5
2,122,201	-		HGI48_RS09825	0.19	+0.4
2,122,217	+		HGI48_RS09825	0.20	+0.1
2,122,263	+				+0.7
2,122,263	+				+0.1
2,122,264	-		HGI48_RS09825	0.24	-0.2
2,122,264	-		HGI48_RS09825	0.24	+0.5
2,122,264	-		HGI48_RS09825	0.24	-1.7
2,122,305	+		HGI48_RS09825	0.27	+0.1
2,122,412	+		HGI48_RS09825	0.34	-0.1
2,122,413	-		HGI48_RS09825	0.34	-0.3
2,122,416	-		HGI48_RS09825	0.35	+1.1
2,122,473	+		HGI48_RS09825	0.39	-0.1
2,122,502	+		HGI48_RS09825	0.41	-1.7
2,122,658	+		HGI48_RS09825	0.52	-0.4
2,122,659	-		HGI48_RS09825	0.52	-0.0
2,122,707	+		HGI48_RS09825	0.56	+0.9
2,122,707	+				+0.6
2,122,722	+		HGI48_RS09825	0.57	-0.9
2,122,722	+		HGI48_RS09825	0.57	+1.0
2,122,723	-		HGI48_RS09825	0.57	-2.2
2,122,782	+		HGI48_RS09825	0.61	-0.5
2,122,782	+		HGI48_RS09825	0.61	+0.1
2,122,782	+		HGI48_RS09825	0.61	+0.9
2,122,782	+		HGI48_RS09825	0.61	-0.2
2,122,783	-		HGI48_RS09825	0.61	-0.7
2,122,837	+		HGI48_RS09825	0.65	+0.1
2,122,838	-		HGI48_RS09825	0.65	+0.2
2,122,884	+		HGI48_RS09825	0.69	-1.0
2,122,885	-		HGI48_RS09825	0.69	-1.4
2,122,885	-		HGI48_RS09825	0.69	+0.0
2,122,885	-		HGI48_RS09825	0.69	+0.5
2,122,885	-		HGI48_RS09825	0.69	-0.6
2,122,888	+		HGI48_RS09825	0.69	-0.9
2,122,889	-		HGI48_RS09825	0.69	+0.5
2,122,906	+		HGI48_RS09825	0.70	-0.4
2,122,906	+		HGI48_RS09825	0.70	-0.6
2,122,929	+		HGI48_RS09825	0.72	+0.1
2,122,929	+		HGI48_RS09825	0.72	-0.6
2,122,930	-		HGI48_RS09825	0.72	+0.4
2,123,033	+		HGI48_RS09825	0.80	-1.2
2,123,091	+		HGI48_RS09825	0.84	-1.5
2,123,091	+		HGI48_RS09825	0.84	+0.2
2,123,091	+		HGI48_RS09825	0.84	-0.3
2,123,091	+		HGI48_RS09825	0.84	-1.2
2,123,092	-		HGI48_RS09825	0.84	-0.6
2,123,092	-				-0.4
2,123,092	-		HGI48_RS09825	0.84	+0.4
2,123,136	+				+0.7
2,123,137	-		HGI48_RS09825	0.87	+0.4
2,123,198	+				+0.7
2,123,198	+				-1.4
2,123,199	-				-1.4
2,123,199	-				-0.1
2,123,199	-				+0.1
2,123,245	-				-1.0
2,123,289	+				-0.1
2,123,308	-				-0.1
2,123,409	-				-1.4
2,123,409	-				+2.3
2,123,478	+				-1.4
2,123,728	-		HGI48_RS09830	0.23	-1.9
2,123,918	-		HGI48_RS09830	0.36	-0.1
2,124,110	-		HGI48_RS09830	0.50	-1.2