Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09320

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,000,865	-		HGI48_RS09310	0.49	-0.3
2,000,919	+		HGI48_RS09310	0.72	-0.5
2,000,919	+		HGI48_RS09310	0.72	-2.4
2,000,948	+		HGI48_RS09310	0.84	-0.1
2,000,949	-		HGI48_RS09310	0.84	+0.4
2,000,949	-		HGI48_RS09310	0.84	-1.4
2,000,972	-				+1.4
2,001,058	+		HGI48_RS09315	0.13	-0.8
2,001,058	+		HGI48_RS09315	0.13	-0.8
2,001,059	-		HGI48_RS09315	0.13	+0.4
2,001,059	-		HGI48_RS09315	0.13	+0.7
2,001,059	-		HGI48_RS09315	0.13	-0.6
2,001,059	-		HGI48_RS09315	0.13	-1.3
2,001,059	-		HGI48_RS09315	0.13	+0.9
2,001,258	+		HGI48_RS09315	0.39	+0.1
2,001,258	+				-1.4
2,001,258	+		HGI48_RS09315	0.39	-0.9
2,001,258	+		HGI48_RS09315	0.39	-1.9
2,001,259	-		HGI48_RS09315	0.39	-0.4
2,001,259	-		HGI48_RS09315	0.39	-0.1
2,001,259	-		HGI48_RS09315	0.39	-0.3
2,001,278	+		HGI48_RS09315	0.42	+0.4
2,001,534	-		HGI48_RS09315	0.76	+0.3
2,001,534	-		HGI48_RS09315	0.76	-0.9
2,001,544	+		HGI48_RS09315	0.78	+1.0
2,001,544	+		HGI48_RS09315	0.78	-0.6
2,001,544	+		HGI48_RS09315	0.78	+0.4
2,001,668	-				+0.1
2,001,823	+		HGI48_RS09320	0.11	-0.3
2,001,983	+				+2.0
2,001,983	+		HGI48_RS09320	0.26	+0.2
2,001,984	-		HGI48_RS09320	0.26	-2.2
2,001,984	-		HGI48_RS09320	0.26	-1.2
2,001,984	-		HGI48_RS09320	0.26	-0.2
2,001,984	-		HGI48_RS09320	0.26	+0.8
2,001,984	-		HGI48_RS09320	0.26	-0.3
2,001,985	+		HGI48_RS09320	0.26	-0.2
2,002,040	+		HGI48_RS09320	0.31	+0.5
2,002,040	+		HGI48_RS09320	0.31	-0.2
2,002,040	+				-0.9
2,002,040	+		HGI48_RS09320	0.31	-2.4
2,002,075	+		HGI48_RS09320	0.34	-0.7
2,002,196	+				+2.0
2,002,196	+		HGI48_RS09320	0.46	-0.4
2,002,196	+		HGI48_RS09320	0.46	+0.5
2,002,196	+		HGI48_RS09320	0.46	+1.1
2,002,220	+		HGI48_RS09320	0.48	+0.1
2,002,220	+		HGI48_RS09320	0.48	+0.3
2,002,220	+		HGI48_RS09320	0.48	-0.3
2,002,220	+		HGI48_RS09320	0.48	-1.2
2,002,221	-		HGI48_RS09320	0.48	-0.7
2,002,221	-		HGI48_RS09320	0.48	-0.2
2,002,238	+				-1.4
2,002,274	-		HGI48_RS09320	0.53	-1.1
2,002,307	+		HGI48_RS09320	0.56	-1.9
2,002,307	+		HGI48_RS09320	0.56	-0.9
2,002,307	+		HGI48_RS09320	0.56	+0.4
2,002,348	+		HGI48_RS09320	0.60	+1.0
2,002,348	+		HGI48_RS09320	0.60	+0.5
2,002,349	-				-0.4
2,002,377	-		HGI48_RS09320	0.62	-0.3
2,002,394	+		HGI48_RS09320	0.64	-1.1
2,002,394	+		HGI48_RS09320	0.64	+0.4
2,002,394	+		HGI48_RS09320	0.64	+1.1
2,002,409	+		HGI48_RS09320	0.65	-0.8
2,002,479	+				+1.6
2,002,479	+		HGI48_RS09320	0.72	-2.4
2,002,480	-		HGI48_RS09320	0.72	-0.8
2,002,480	-		HGI48_RS09320	0.72	-1.2
2,002,480	-		HGI48_RS09320	0.72	-0.1
2,002,522	+				+0.7
2,002,522	+		HGI48_RS09320	0.76	+0.7
2,002,544	+		HGI48_RS09320	0.78	+0.4
2,002,545	-				+1.1
2,002,547	+		HGI48_RS09320	0.78	+0.6
2,002,547	+		HGI48_RS09320	0.78	-1.9
2,002,547	+		HGI48_RS09320	0.78	-1.3
2,002,548	-		HGI48_RS09320	0.78	+0.3
2,002,579	+		HGI48_RS09320	0.81	-0.6
2,002,624	+		HGI48_RS09320	0.85	+0.1
2,002,624	+				+2.1
2,002,624	+		HGI48_RS09320	0.85	-0.3
2,002,804	-				-1.0
2,002,804	-				-1.8
2,002,804	-				-0.3
2,002,857	+				-2.6
2,002,857	+				+1.5
2,002,857	+				+0.3
2,002,857	+				+1.0
2,002,857	+				+0.5
2,002,858	-				-0.0
2,002,858	-				-0.7
2,002,858	-				+1.1
2,002,860	+				+1.0
2,002,971	+				+1.1
2,002,972	-		HGI48_RS09325	0.19	-0.7
2,002,972	-		HGI48_RS09325	0.19	-0.6
2,002,999	-		HGI48_RS09325	0.21	+0.1
2,003,045	+		HGI48_RS09325	0.26	+0.1
2,003,046	-				+0.1
2,003,086	-		HGI48_RS09325	0.30	+0.3
2,003,157	+		HGI48_RS09325	0.37	-1.2
2,003,158	-		HGI48_RS09325	0.37	-0.1
2,003,158	-		HGI48_RS09325	0.37	-0.7
2,003,188	+		HGI48_RS09325	0.40	+1.0
2,003,188	+				+1.1
2,003,188	+		HGI48_RS09325	0.40	+0.3
2,003,188	+		HGI48_RS09325	0.40	-1.0
2,003,188	+		HGI48_RS09325	0.40	-1.2
2,003,188	+		HGI48_RS09325	0.40	+0.5
2,003,189	-		HGI48_RS09325	0.40	-0.2
2,003,189	-		HGI48_RS09325	0.40	-0.6
2,003,190	+				+2.1
2,003,190	+		HGI48_RS09325	0.40	-2.4
2,003,190	+		HGI48_RS09325	0.40	-1.8
2,003,191	-		HGI48_RS09325	0.41	+0.4
2,003,191	-		HGI48_RS09325	0.41	+0.1
2,003,191	-		HGI48_RS09325	0.41	-1.3
2,003,191	-		HGI48_RS09325	0.41	-0.9
2,003,191	-		HGI48_RS09325	0.41	+0.5
2,003,191	-		HGI48_RS09325	0.41	+0.0
2,003,191	-		HGI48_RS09325	0.41	-1.3
2,003,191	-		HGI48_RS09325	0.41	-2.2
2,003,255	-		HGI48_RS09325	0.47	+0.9
2,003,308	+		HGI48_RS09325	0.52	-1.9
2,003,308	+		HGI48_RS09325	0.52	+0.4
2,003,309	-		HGI48_RS09325	0.52	-0.9
2,003,309	-		HGI48_RS09325	0.52	+0.1
2,003,337	+		HGI48_RS09325	0.55	-1.5
2,003,337	+		HGI48_RS09325	0.55	-0.3
2,003,337	+		HGI48_RS09325	0.55	+1.0
2,003,408	+		HGI48_RS09325	0.62	-1.2
2,003,409	-		HGI48_RS09325	0.62	-0.1
2,003,409	-		HGI48_RS09325	0.62	-0.3
2,003,626	+		HGI48_RS09325	0.84	-2.4
2,003,626	+		HGI48_RS09325	0.84	-0.3
2,003,718	+				+0.6
2,003,718	+				+1.1