Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08075

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,734,131	+				+0.4
1,734,132	-				-1.4
1,734,132	-				+0.2
1,734,132	-				+1.2
1,734,146	-				-0.8
1,734,146	-				-1.0
1,734,221	-				-0.5
1,734,303	+		HGI48_RS08070	0.15	+0.4
1,734,304	-		HGI48_RS08070	0.15	+1.5
1,734,499	+		HGI48_RS08070	0.42	-0.1
1,734,513	+		HGI48_RS08070	0.44	-0.8
1,734,513	+		HGI48_RS08070	0.44	+1.4
1,734,513	+		HGI48_RS08070	0.44	-1.1
1,734,514	-		HGI48_RS08070	0.44	-0.5
1,734,514	-		HGI48_RS08070	0.44	-0.5
1,734,655	-		HGI48_RS08070	0.64	-0.1
1,734,760	+		HGI48_RS08070	0.79	+0.8
1,734,761	-		HGI48_RS08070	0.79	-0.2
1,734,762	+		HGI48_RS08070	0.79	+0.2
1,734,762	+		HGI48_RS08070	0.79	+0.2
1,734,762	+				-1.4
1,734,763	-				-0.8
1,734,763	-		HGI48_RS08070	0.79	-0.8
1,734,763	-		HGI48_RS08070	0.79	-0.8
1,734,921	+				+0.6
1,734,921	+				+0.9
1,734,935	+				-1.1
1,734,935	+				-0.2
1,734,946	+				+0.2
1,734,946	+				+0.2
1,734,947	-				+0.7
1,735,037	+				-0.0
1,735,114	+				+0.2
1,735,115	-				+0.2
1,735,223	-		HGI48_RS08075	0.12	-0.6
1,735,226	+		HGI48_RS08075	0.12	-0.1
1,735,339	-		HGI48_RS08075	0.26	+0.2
1,735,349	+		HGI48_RS08075	0.27	-1.6
1,735,349	+		HGI48_RS08075	0.27	-1.8
1,735,350	-		HGI48_RS08075	0.28	-0.3
1,735,422	-		HGI48_RS08075	0.37	-0.1
1,735,422	-		HGI48_RS08075	0.37	-2.1
1,735,436	+		HGI48_RS08075	0.38	+0.1
1,735,436	+		HGI48_RS08075	0.38	+0.2
1,735,437	-		HGI48_RS08075	0.38	-0.4
1,735,437	-		HGI48_RS08075	0.38	-1.2
1,735,437	-		HGI48_RS08075	0.38	-2.6
1,735,498	+		HGI48_RS08075	0.46	-1.5
1,735,505	+				-0.4
1,735,505	+		HGI48_RS08075	0.47	-0.3
1,735,505	+		HGI48_RS08075	0.47	-0.6
1,735,506	-		HGI48_RS08075	0.47	-0.2
1,735,726	+				+1.2
1,735,859	+				-0.7
1,736,073	-		HGI48_RS08080	0.15	+0.2
1,736,073	-		HGI48_RS08080	0.15	+0.0
1,736,295	+		HGI48_RS08080	0.47	-0.8
1,736,295	+		HGI48_RS08080	0.47	-0.2
1,736,410	-		HGI48_RS08080	0.63	+0.2
1,736,432	+		HGI48_RS08080	0.67	+0.9
1,736,433	-		HGI48_RS08080	0.67	+0.2
1,736,501	+		HGI48_RS08080	0.76	-0.1
1,736,502	-		HGI48_RS08080	0.77	+0.4
1,736,502	-		HGI48_RS08080	0.77	-0.6
1,736,548	+		HGI48_RS08080	0.83	-0.6
1,736,548	+		HGI48_RS08080	0.83	-0.8
1,736,583	+		HGI48_RS08080	0.88	-0.8
1,736,743	+		HGI48_RS08085	0.21	-0.3
1,736,746	+				+1.8
1,736,746	+		HGI48_RS08085	0.22	-0.6
1,736,747	-				-1.4
1,736,747	-		HGI48_RS08085	0.22	-1.6
1,736,747	-		HGI48_RS08085	0.22	-0.0
1,736,747	-				+0.2
1,736,817	+		HGI48_RS08085	0.39	-0.4
1,736,818	-		HGI48_RS08085	0.39	+0.3
1,736,860	+		HGI48_RS08085	0.49	-0.1
1,736,861	-		HGI48_RS08085	0.50	-1.3
1,736,862	+		HGI48_RS08085	0.50	-2.1
1,736,863	-		HGI48_RS08085	0.50	-0.8
1,736,863	-		HGI48_RS08085	0.50	+0.9