Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,733,376	+		HGI48_RS08065	0.43	-0.6
1,733,662	-				-0.4
1,733,681	+		HGI48_RS08065	0.65	-0.8
1,733,681	+		HGI48_RS08065	0.65	+0.8
1,733,763	+		HGI48_RS08065	0.70	+0.2
1,733,763	+				+0.6
1,733,764	-		HGI48_RS08065	0.71	-0.3
1,733,764	-		HGI48_RS08065	0.71	+0.2
1,733,764	-		HGI48_RS08065	0.71	-1.0
1,733,764	-		HGI48_RS08065	0.71	-0.1
1,733,764	-		HGI48_RS08065	0.71	+0.7
1,733,842	+		HGI48_RS08065	0.76	+1.2
1,733,842	+		HGI48_RS08065	0.76	+0.6
1,733,842	+		HGI48_RS08065	0.76	-0.1
1,733,843	-		HGI48_RS08065	0.76	-0.0
1,733,843	-		HGI48_RS08065	0.76	-0.3
1,733,843	-		HGI48_RS08065	0.76	-0.6
1,733,885	+		HGI48_RS08065	0.79	-0.8
1,733,886	-		HGI48_RS08065	0.79	-0.6
1,733,896	+		HGI48_RS08065	0.80	-0.6
1,733,896	+		HGI48_RS08065	0.80	+0.1
1,733,896	+		HGI48_RS08065	0.80	+0.2
1,733,896	+		HGI48_RS08065	0.80	-1.7
1,733,896	+		HGI48_RS08065	0.80	+0.4
1,733,896	+		HGI48_RS08065	0.80	-1.9
1,733,896	+		HGI48_RS08065	0.80	-0.2
1,733,897	-		HGI48_RS08065	0.80	-0.5
1,733,897	-		HGI48_RS08065	0.80	+0.1
1,733,897	-		HGI48_RS08065	0.80	-1.0
1,733,934	-		HGI48_RS08065	0.82	+1.8
1,733,934	-				+1.8
1,733,973	+		HGI48_RS08065	0.85	+0.1
1,733,973	+		HGI48_RS08065	0.85	-0.4
1,733,973	+		HGI48_RS08065	0.85	-0.4
1,733,980	-				-0.4
1,734,121	+				-0.4
1,734,121	+				+0.8
1,734,121	+				-0.0
1,734,122	-				-1.6
1,734,122	-				-0.2
1,734,122	-				-1.4
1,734,122	-				-0.1
1,734,131	+				+0.4
1,734,132	-				-1.4
1,734,132	-				+0.2
1,734,132	-				+1.2
1,734,146	-				-0.8
1,734,146	-				-1.0
1,734,221	-				-0.5
1,734,303	+		HGI48_RS08070	0.15	+0.4
1,734,304	-		HGI48_RS08070	0.15	+1.5
1,734,499	+		HGI48_RS08070	0.42	-0.1
1,734,513	+		HGI48_RS08070	0.44	-0.8
1,734,513	+		HGI48_RS08070	0.44	+1.4
1,734,513	+		HGI48_RS08070	0.44	-1.1
1,734,514	-		HGI48_RS08070	0.44	-0.5
1,734,514	-		HGI48_RS08070	0.44	-0.5
1,734,655	-		HGI48_RS08070	0.64	-0.1
1,734,760	+		HGI48_RS08070	0.79	+0.8
1,734,761	-		HGI48_RS08070	0.79	-0.2
1,734,762	+		HGI48_RS08070	0.79	+0.2
1,734,762	+		HGI48_RS08070	0.79	+0.2
1,734,762	+				-1.4
1,734,763	-				-0.8
1,734,763	-		HGI48_RS08070	0.79	-0.8
1,734,763	-		HGI48_RS08070	0.79	-0.8
1,734,921	+				+0.6
1,734,921	+				+0.9
1,734,935	+				-1.1
1,734,935	+				-0.2
1,734,946	+				+0.2
1,734,946	+				+0.2
1,734,947	-				+0.7
1,735,037	+				-0.0
1,735,114	+				+0.2
1,735,115	-				+0.2
1,735,223	-		HGI48_RS08075	0.12	-0.6
1,735,226	+		HGI48_RS08075	0.12	-0.1
1,735,339	-		HGI48_RS08075	0.26	+0.2
1,735,349	+		HGI48_RS08075	0.27	-1.6
1,735,349	+		HGI48_RS08075	0.27	-1.8
1,735,350	-		HGI48_RS08075	0.28	-0.3
1,735,422	-		HGI48_RS08075	0.37	-0.1
1,735,422	-		HGI48_RS08075	0.37	-2.1
1,735,436	+		HGI48_RS08075	0.38	+0.1
1,735,436	+		HGI48_RS08075	0.38	+0.2
1,735,437	-		HGI48_RS08075	0.38	-0.4
1,735,437	-		HGI48_RS08075	0.38	-1.2
1,735,437	-		HGI48_RS08075	0.38	-2.6
1,735,498	+		HGI48_RS08075	0.46	-1.5
1,735,505	+				-0.4
1,735,505	+		HGI48_RS08075	0.47	-0.3
1,735,505	+		HGI48_RS08075	0.47	-0.6
1,735,506	-		HGI48_RS08075	0.47	-0.2
1,735,726	+				+1.2
1,735,859	+				-0.7