Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07900

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,688,675	-				-0.2
1,688,787	-				-0.8
1,688,789	+				+0.6
1,688,789	+				-0.5
1,688,789	+				-0.7
1,688,789	+				+0.5
1,688,789	+				-0.4
1,688,789	+				+0.2
1,688,789	+				-2.1
1,688,790	-				+0.3
1,688,790	-				-1.8
1,688,790	-				-0.5
1,688,790	-				+1.0
1,688,790	-				-1.1
1,688,790	-				-1.4
1,688,790	-				-1.1
1,688,790	-				+0.2
1,688,790	-				+0.2
1,688,790	-				-0.2
1,688,790	-				+0.9
1,688,790	-				+0.4
1,688,790	-				+1.9
1,688,861	+				+0.1
1,688,861	+				+0.2
1,688,861	+				+1.2
1,688,862	-				-1.1
1,688,862	-				-0.5
1,688,862	-				+2.0
1,688,863	+				-1.1
1,688,863	+				+1.0
1,688,864	-				-2.1
1,688,864	-				+0.1
1,688,891	+				-2.1
1,688,892	-				-1.0
1,688,892	-				-1.8
1,688,911	-				-0.5
1,688,970	+				-2.1
1,688,978	+				+1.1
1,688,978	+				-1.2
1,688,979	-				-1.0
1,689,047	+				-1.8
1,689,245	+		HGI48_RS07895	0.53	-1.0
1,689,245	+		HGI48_RS07895	0.53	-1.1
1,689,245	+		HGI48_RS07895	0.53	-0.3
1,689,245	+		HGI48_RS07895	0.53	-2.4
1,689,245	+		HGI48_RS07895	0.53	-2.1
1,689,246	-		HGI48_RS07895	0.53	-0.5
1,689,246	-		HGI48_RS07895	0.53	+0.2
1,689,246	-		HGI48_RS07895	0.53	-1.8
1,689,246	-		HGI48_RS07895	0.53	-2.4
1,689,322	-		HGI48_RS07895	0.78	+0.5
1,689,322	-		HGI48_RS07895	0.78	+0.7
1,689,327	+		HGI48_RS07895	0.80	+0.2
1,689,327	+		HGI48_RS07895	0.80	-0.1
1,689,327	+		HGI48_RS07895	0.80	-1.4
1,689,327	+		HGI48_RS07895	0.80	-0.9
1,689,328	-		HGI48_RS07895	0.80	+1.1
1,689,328	-		HGI48_RS07895	0.80	+0.2
1,689,328	-		HGI48_RS07895	0.80	-1.8
1,689,328	-		HGI48_RS07895	0.80	-0.2
1,689,328	-		HGI48_RS07895	0.80	-1.8
1,689,328	-				+0.2
1,689,329	+		HGI48_RS07895	0.80	+0.2
1,689,329	+		HGI48_RS07895	0.80	-0.5
1,689,329	+		HGI48_RS07895	0.80	-0.2
1,689,330	-		HGI48_RS07895	0.81	-2.8
1,689,502	+		HGI48_RS07900	0.28	-0.5
1,689,502	+		HGI48_RS07900	0.28	-0.5
1,689,502	+		HGI48_RS07900	0.28	-1.5
1,689,502	+		HGI48_RS07900	0.28	-2.4
1,689,503	-				-0.8
1,689,579	+				+0.2
1,689,579	+		HGI48_RS07900	0.46	-0.0
1,689,579	+		HGI48_RS07900	0.46	-0.4
1,689,579	+		HGI48_RS07900	0.46	-1.6
1,689,579	+		HGI48_RS07900	0.46	-0.5
1,689,579	+		HGI48_RS07900	0.46	-0.4
1,689,579	+		HGI48_RS07900	0.46	-0.7
1,689,579	+		HGI48_RS07900	0.46	+0.5
1,689,579	+		HGI48_RS07900	0.46	-1.1
1,689,580	-		HGI48_RS07900	0.46	+0.8
1,689,580	-		HGI48_RS07900	0.46	-0.2
1,689,580	-		HGI48_RS07900	0.46	+0.5
1,689,580	-		HGI48_RS07900	0.46	-0.8
1,689,580	-		HGI48_RS07900	0.46	-1.6
1,689,580	-		HGI48_RS07900	0.46	-1.8
1,689,580	-				+0.9
1,689,580	-		HGI48_RS07900	0.46	+0.1
1,689,580	-		HGI48_RS07900	0.46	+0.2
1,689,580	-		HGI48_RS07900	0.46	-0.1
1,689,603	+		HGI48_RS07900	0.52	+0.5
1,689,739	-		HGI48_RS07900	0.84	-0.4
1,689,739	-		HGI48_RS07900	0.84	-0.2
1,689,768	-				-1.1
1,689,780	+				-1.4
1,689,781	-				-0.1
1,689,795	-				-1.8
1,689,803	+				+0.1
1,689,804	-				-2.1
1,689,815	-				-0.2
1,689,815	-				-0.5
1,689,837	+				+0.8
1,689,837	+				-0.4
1,689,837	+				-1.4
1,689,837	+				+0.6
1,689,837	+				+0.3
1,689,837	+				+1.9
1,689,838	-				-0.5
1,689,838	-				-0.1
1,689,846	-				-0.2
1,689,849	+				+0.3
1,689,861	+				-1.4
1,689,875	-				+1.0
1,689,902	-				-0.1
1,689,903	+				-1.1
1,689,903	+				-0.5
1,689,904	-				-0.6
1,689,955	-				+0.5
1,689,988	-				+0.7
1,690,171	+		HGI48_RS07905	0.11	+1.1
1,690,270	+		HGI48_RS07905	0.19	-0.5
1,690,270	+		HGI48_RS07905	0.19	+0.4
1,690,270	+		HGI48_RS07905	0.19	-0.2
1,690,271	-		HGI48_RS07905	0.19	-0.2
1,690,271	-		HGI48_RS07905	0.19	-1.6
1,690,299	+		HGI48_RS07905	0.21	-0.2
1,690,299	+				+0.6
1,690,300	-		HGI48_RS07905	0.21	-1.1
1,690,307	-				+1.8
1,690,372	-		HGI48_RS07905	0.27	-1.8
1,690,372	-		HGI48_RS07905	0.27	-0.5
1,690,377	+		HGI48_RS07905	0.27	-2.1
1,690,378	-		HGI48_RS07905	0.27	+0.3
1,690,491	-		HGI48_RS07905	0.36	+0.7
1,690,517	-		HGI48_RS07905	0.38	-0.2
1,690,621	-		HGI48_RS07905	0.46	-3.0
1,690,762	+		HGI48_RS07905	0.56	-0.0
1,690,762	+		HGI48_RS07905	0.56	+0.0
1,690,762	+		HGI48_RS07905	0.56	+0.4
1,690,763	-		HGI48_RS07905	0.56	+1.4