Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07765

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,660,401	+		HGI48_RS07760	0.29	-0.6
1,660,402	-		HGI48_RS07760	0.29	-0.0
1,660,514	+		HGI48_RS07760	0.40	+1.0
1,660,554	+		HGI48_RS07760	0.43	+0.6
1,660,577	-				+0.9
1,660,740	-		HGI48_RS07760	0.60	+0.0
1,660,740	-		HGI48_RS07760	0.60	+0.2
1,660,740	-		HGI48_RS07760	0.60	+0.5
1,660,742	+		HGI48_RS07760	0.60	+0.2
1,660,742	+		HGI48_RS07760	0.60	-0.5
1,660,742	+		HGI48_RS07760	0.60	+0.2
1,660,742	+				+0.8
1,660,808	+				+0.2
1,660,899	+		HGI48_RS07760	0.75	-0.3
1,660,899	+		HGI48_RS07760	0.75	-0.1
1,660,899	+		HGI48_RS07760	0.75	-2.1
1,660,900	-		HGI48_RS07760	0.75	-1.0
1,660,900	-				-1.4
1,660,900	-		HGI48_RS07760	0.75	+1.8
1,660,900	-		HGI48_RS07760	0.75	+0.1
1,660,900	-		HGI48_RS07760	0.75	-0.1
1,660,902	-				+0.2
1,660,902	-		HGI48_RS07760	0.75	+0.8
1,660,902	-		HGI48_RS07760	0.75	-1.0
1,661,020	+		HGI48_RS07760	0.86	-0.5
1,661,020	+		HGI48_RS07760	0.86	-0.8
1,661,020	+		HGI48_RS07760	0.86	-0.5
1,661,151	+				-0.7
1,661,151	+				+0.2
1,661,152	-				+0.6
1,661,152	-				-2.5
1,661,152	-				-0.5
1,661,152	-				+0.6
1,661,183	+				-0.4
1,661,184	-				+0.5
1,661,184	-				+0.4
1,661,184	-				+0.2
1,661,185	+				+0.1
1,661,185	+				+0.4
1,661,186	-				-0.1
1,661,186	-				+0.7
1,661,186	-				+0.4
1,661,278	-		HGI48_RS07765	0.10	+0.5
1,661,278	-		HGI48_RS07765	0.10	+0.2
1,661,332	+		HGI48_RS07765	0.16	-0.1
1,661,414	-		HGI48_RS07765	0.25	-0.1
1,661,429	+		HGI48_RS07765	0.27	-2.6
1,661,429	+		HGI48_RS07765	0.27	+0.2
1,661,429	+		HGI48_RS07765	0.27	+1.1
1,661,429	+		HGI48_RS07765	0.27	+0.2
1,661,430	-				-1.4
1,661,514	-		HGI48_RS07765	0.36	+0.2
1,661,696	-		HGI48_RS07765	0.55	-0.7
1,661,732	+		HGI48_RS07765	0.59	+0.5
1,661,732	+		HGI48_RS07765	0.59	-0.5
1,661,732	+		HGI48_RS07765	0.59	-0.8
1,661,732	+		HGI48_RS07765	0.59	-0.1
1,661,732	+		HGI48_RS07765	0.59	+0.4
1,661,733	-		HGI48_RS07765	0.59	+1.0
1,661,733	-		HGI48_RS07765	0.59	-1.8
1,661,892	+				+1.2
1,661,892	+		HGI48_RS07765	0.77	-0.5
1,661,893	-		HGI48_RS07765	0.77	-0.1
1,662,094	+				+0.6
1,662,094	+				+0.2
1,662,095	-				-0.6
1,662,129	-				+0.4
1,662,129	-				+0.5
1,662,187	+				-0.8
1,662,187	+				-0.7
1,662,188	-				+0.5
1,662,188	-				-0.8
1,662,188	-				+1.2
1,662,188	-				+0.4
1,662,188	-				-0.5
1,662,188	-				+0.1
1,662,252	+				+0.0
1,662,252	+				-0.1
1,662,253	-				+0.2
1,662,253	-				+1.0
1,662,270	+				+0.0
1,662,353	+				-0.0
1,662,353	+				+0.9
1,662,482	+		HGI48_RS07770	0.17	+0.5
1,662,483	-				+1.4
1,662,515	+		HGI48_RS07770	0.21	-1.9
1,662,515	+		HGI48_RS07770	0.21	-2.1
1,662,516	-		HGI48_RS07770	0.21	+1.0
1,662,516	-		HGI48_RS07770	0.21	-3.0
1,662,516	-		HGI48_RS07770	0.21	+0.3
1,662,581	+		HGI48_RS07770	0.30	-0.0
1,662,581	+		HGI48_RS07770	0.30	+0.0
1,662,682	+		HGI48_RS07770	0.43	-2.1
1,662,682	+		HGI48_RS07770	0.43	-0.3
1,662,682	+		HGI48_RS07770	0.43	+0.8
1,662,682	+		HGI48_RS07770	0.43	-0.6
1,662,682	+		HGI48_RS07770	0.43	-1.4
1,662,682	+		HGI48_RS07770	0.43	-1.0
1,662,683	-		HGI48_RS07770	0.43	-0.2
1,662,683	-		HGI48_RS07770	0.43	+0.0
1,662,683	-		HGI48_RS07770	0.43	+0.5
1,662,684	+				+1.2
1,662,684	+		HGI48_RS07770	0.43	+0.0
1,662,684	+		HGI48_RS07770	0.43	-1.7
1,662,684	+		HGI48_RS07770	0.43	-1.5
1,662,684	+		HGI48_RS07770	0.43	+1.8
1,662,684	+		HGI48_RS07770	0.43	-0.1
1,662,684	+		HGI48_RS07770	0.43	+0.5
1,662,684	+		HGI48_RS07770	0.43	-0.2
1,662,684	+		HGI48_RS07770	0.43	-0.8
1,662,685	-		HGI48_RS07770	0.44	-3.0
1,662,685	-		HGI48_RS07770	0.44	-0.4
1,662,685	-		HGI48_RS07770	0.44	-0.3
1,662,685	-		HGI48_RS07770	0.44	-0.1
1,662,685	-		HGI48_RS07770	0.44	+0.6
1,662,685	-		HGI48_RS07770	0.44	+0.6
1,662,685	-				+2.0
1,662,685	-		HGI48_RS07770	0.44	-2.4
1,662,685	-		HGI48_RS07770	0.44	-0.0
1,662,685	-		HGI48_RS07770	0.44	-1.0
1,662,685	-		HGI48_RS07770	0.44	-0.8
1,662,685	-		HGI48_RS07770	0.44	-0.0
1,662,685	-				+0.8
1,662,685	-				+0.2
1,662,716	+		HGI48_RS07770	0.48	-0.8
1,662,716	+		HGI48_RS07770	0.48	+0.5
1,662,717	-		HGI48_RS07770	0.48	-0.1
1,662,920	+		HGI48_RS07770	0.74	-0.4
1,662,920	+		HGI48_RS07770	0.74	-0.3
1,662,920	+		HGI48_RS07770	0.74	-0.8
1,662,921	-		HGI48_RS07770	0.74	+0.2
1,663,048	+				-0.6
1,663,048	+				+0.6
1,663,048	+				+1.6
1,663,048	+				+0.5
1,663,048	+				-2.6
1,663,048	+				-0.2
1,663,049	-				-0.6
1,663,049	-				+0.2
1,663,049	-				-0.3
1,663,049	-				+0.5
1,663,049	-				-0.4
1,663,049	-				+2.8
1,663,049	-				+0.6
1,663,052	+				-0.3
1,663,052	+				-0.5
1,663,052	+				-0.6
1,663,052	+				+0.2
1,663,053	-				-0.8
1,663,053	-				+0.5
1,663,053	-				-0.0
1,663,081	-				+0.2
1,663,100	+				+0.2
1,663,100	+				-0.1
1,663,101	-				-2.8