Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07460

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,587,743	-				+0.8
1,587,788	+		HGI48_RS07450	0.53	-1.1
1,587,789	-				-1.4
1,587,794	+		HGI48_RS07450	0.54	+0.4
1,587,794	+		HGI48_RS07450	0.54	-0.5
1,587,794	+		HGI48_RS07450	0.54	+0.2
1,587,794	+		HGI48_RS07450	0.54	-0.4
1,587,794	+		HGI48_RS07450	0.54	-0.5
1,587,794	+				+0.2
1,587,794	+		HGI48_RS07450	0.54	-1.8
1,587,794	+		HGI48_RS07450	0.54	+0.9
1,587,794	+		HGI48_RS07450	0.54	-1.1
1,587,794	+		HGI48_RS07450	0.54	+0.0
1,587,794	+				+0.2
1,587,795	-				+0.8
1,587,795	-		HGI48_RS07450	0.54	+0.1
1,587,795	-		HGI48_RS07450	0.54	-2.4
1,587,795	-		HGI48_RS07450	0.54	+0.1
1,587,795	-		HGI48_RS07450	0.54	+1.6
1,587,795	-		HGI48_RS07450	0.54	-0.8
1,587,795	-		HGI48_RS07450	0.54	-0.9
1,587,795	-		HGI48_RS07450	0.54	-0.8
1,587,795	-		HGI48_RS07450	0.54	-1.8
1,587,795	-				+0.2
1,587,795	-		HGI48_RS07450	0.54	-1.0
1,587,795	-		HGI48_RS07450	0.54	+0.2
1,587,795	-		HGI48_RS07450	0.54	+0.1
1,587,795	-				+2.4
1,587,795	-		HGI48_RS07450	0.54	+0.0
1,587,795	-		HGI48_RS07450	0.54	+0.1
1,587,991	+				-0.8
1,588,042	+				-0.8
1,588,465	+		HGI48_RS07455	0.81	-1.1
1,588,465	+		HGI48_RS07455	0.81	-0.8
1,588,575	+				+0.2
1,588,575	+				-1.0
1,588,575	+				-1.0
1,588,575	+				+0.4
1,588,575	+				+0.4
1,588,575	+				-0.2
1,588,575	+				-0.6
1,588,575	+				+0.6
1,588,575	+				-1.0
1,588,575	+				+1.6
1,588,575	+				-1.8
1,588,576	-				-0.5
1,588,576	-				-1.8
1,588,576	-				+0.2
1,588,576	-				-0.4
1,588,576	-				-0.4
1,588,576	-				+0.0
1,588,576	-				+0.2
1,588,576	-				-1.5
1,588,576	-				+0.7
1,588,624	+				-0.1
1,588,625	-				-0.9
1,588,730	+		HGI48_RS07460	0.14	-2.8
1,588,731	-		HGI48_RS07460	0.15	+0.2
1,588,731	-		HGI48_RS07460	0.15	+0.6
1,588,734	+		HGI48_RS07460	0.15	-0.6
1,588,734	+		HGI48_RS07460	0.15	+0.6
1,588,734	+		HGI48_RS07460	0.15	+0.5
1,588,786	+				-0.4
1,588,786	+		HGI48_RS07460	0.20	+0.4
1,588,786	+				+0.6
1,588,786	+		HGI48_RS07460	0.20	+1.0
1,588,787	-		HGI48_RS07460	0.20	-0.8
1,588,787	-		HGI48_RS07460	0.20	+0.2
1,588,787	-				-0.4
1,588,787	-		HGI48_RS07460	0.20	-0.1
1,588,896	+		HGI48_RS07460	0.30	-0.5
1,588,896	+		HGI48_RS07460	0.30	-0.8
1,588,935	+		HGI48_RS07460	0.33	-0.5
1,588,935	+				+2.0
1,588,935	+		HGI48_RS07460	0.33	-0.1
1,588,935	+		HGI48_RS07460	0.33	-0.4
1,588,935	+		HGI48_RS07460	0.33	-0.4
1,588,935	+				+0.2
1,588,936	-		HGI48_RS07460	0.33	-0.1
1,588,936	-		HGI48_RS07460	0.33	-0.3
1,588,936	-				+0.2
1,588,936	-		HGI48_RS07460	0.33	-0.5
1,588,936	-		HGI48_RS07460	0.33	+1.0
1,588,936	-		HGI48_RS07460	0.33	-1.4
1,588,936	-		HGI48_RS07460	0.33	+0.8
1,588,941	+		HGI48_RS07460	0.34	-1.1
1,588,941	+		HGI48_RS07460	0.34	-2.1
1,588,941	+		HGI48_RS07460	0.34	-0.3
1,588,941	+		HGI48_RS07460	0.34	+0.8
1,588,942	-		HGI48_RS07460	0.34	-0.1
1,588,942	-		HGI48_RS07460	0.34	+1.0
1,588,942	-		HGI48_RS07460	0.34	-0.8
1,588,942	-		HGI48_RS07460	0.34	-0.2
1,588,943	+		HGI48_RS07460	0.34	-0.9
1,588,944	-		HGI48_RS07460	0.34	-1.9
1,588,944	-		HGI48_RS07460	0.34	-1.8
1,589,218	-		HGI48_RS07460	0.59	+0.1
1,589,259	+		HGI48_RS07460	0.63	-1.2
1,589,351	+		HGI48_RS07460	0.71	-0.8
1,589,382	-		HGI48_RS07460	0.74	-0.2
1,589,574	+				+0.2
1,589,574	+				-0.4
1,589,574	+				-0.1
1,589,574	+				-0.2
1,589,575	-				-1.6
1,589,575	-				-1.2
1,589,575	-				-0.9
1,589,575	-				+0.3
1,589,660	-				+0.5
1,589,660	-				-0.0
1,589,660	-				-1.4
1,589,661	+				-0.1
1,589,661	+				-0.9
1,589,662	-				+0.2
1,589,662	-				+0.4
1,589,662	-				+0.5
1,589,694	+				-1.4
1,590,007	+		HGI48_RS07465	0.43	+0.5
1,590,007	+		HGI48_RS07465	0.43	-0.5
1,590,008	-		HGI48_RS07465	0.43	-2.4
1,590,008	-		HGI48_RS07465	0.43	-0.9
1,590,039	+		HGI48_RS07465	0.47	-0.6
1,590,112	+				-0.8
1,590,112	+				+2.2
1,590,151	+		HGI48_RS07465	0.60	-1.8
1,590,151	+		HGI48_RS07465	0.60	-0.3
1,590,151	+		HGI48_RS07465	0.60	+0.2
1,590,151	+		HGI48_RS07465	0.60	-1.6
1,590,151	+		HGI48_RS07465	0.60	-0.0
1,590,151	+		HGI48_RS07465	0.60	-1.0
1,590,151	+		HGI48_RS07465	0.60	-0.1
1,590,151	+		HGI48_RS07465	0.60	+0.2
1,590,152	-		HGI48_RS07465	0.60	+0.1
1,590,152	-		HGI48_RS07465	0.60	-0.4
1,590,152	-		HGI48_RS07465	0.60	-0.8
1,590,152	-		HGI48_RS07465	0.60	-2.4
1,590,152	-		HGI48_RS07465	0.60	+0.2
1,590,152	-		HGI48_RS07465	0.60	-1.1
1,590,152	-		HGI48_RS07465	0.60	-0.6
1,590,152	-		HGI48_RS07465	0.60	-0.3
1,590,181	+				+0.6
1,590,181	+				-0.4
1,590,181	+		HGI48_RS07465	0.63	-2.6
1,590,182	-				+0.2
1,590,280	+		HGI48_RS07465	0.75	+0.2
1,590,388	+				-1.4
1,590,388	+		HGI48_RS07465	0.87	-0.8
1,590,389	-		HGI48_RS07465	0.87	+1.2
1,590,389	-				-0.4
1,590,452	-				+0.8
1,590,596	+		HGI48_RS07470	0.11	+0.6