Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06515
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,382,406 | + | HGI48_RS06510 | 0.21 | +0.1 | |
1,382,471 | + | HGI48_RS06510 | 0.27 | -0.0 | |
1,382,471 | + | HGI48_RS06510 | 0.27 | -0.3 | |
1,382,910 | + | HGI48_RS06510 | 0.65 | -0.1 | |
1,382,910 | + | HGI48_RS06510 | 0.65 | +0.6 | |
1,382,911 | - | HGI48_RS06510 | 0.65 | -0.3 | |
1,383,224 | - | -0.7 | |||
1,383,321 | + | -1.3 | |||
1,383,321 | + | -1.5 | |||
1,383,536 | + | HGI48_RS06515 | 0.24 | -0.9 | |
1,383,536 | + | HGI48_RS06515 | 0.24 | +0.5 | |
1,383,536 | + | HGI48_RS06515 | 0.24 | -2.0 | |
1,383,536 | + | HGI48_RS06515 | 0.24 | +0.6 | |
1,384,054 | + | HGI48_RS06515 | 0.84 | -2.2 | |
1,384,174 | - | -0.4 | |||
1,384,193 | + | -0.4 | |||
1,384,194 | - | +0.6 | |||
1,384,194 | - | -0.8 | |||
1,384,231 | + | +0.3 | |||
1,384,232 | - | -0.1 | |||
1,384,519 | - | +0.5 | |||
1,384,519 | - | +0.3 | |||
1,384,569 | + | +1.1 | |||
1,384,589 | - | -0.7 | |||
1,384,668 | + | +0.4 | |||
1,384,687 | + | -1.7 | |||
1,384,693 | + | -1.3 | |||
1,384,695 | + | +0.7 | |||
1,384,709 | + | -0.3 | |||
1,384,714 | + | +0.9 | |||
1,384,816 | + | +0.5 | |||
1,384,821 | + | +0.3 | |||
1,384,824 | + | -2.3 |
Or see this region's nucleotide sequence