Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06250

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,328,162	-				-2.7
1,328,162	-				+0.3
1,328,169	-				-1.8
1,328,213	+				-1.0
1,328,213	+				-2.0
1,328,291	+				-1.3
1,328,291	+				-1.0
1,328,291	+				-0.4
1,328,291	+				-0.9
1,328,291	+				-0.6
1,328,297	-				-0.5
1,328,306	-				+1.6
1,328,362	+				-0.2
1,328,363	-				+1.5
1,328,495	+		HGI48_RS06250	0.31	+0.1
1,328,496	-				+0.9
1,328,659	-		HGI48_RS06250	0.65	-0.7
1,328,681	+		HGI48_RS06250	0.70	+0.2
1,328,681	+		HGI48_RS06250	0.70	-0.7
1,328,681	+		HGI48_RS06250	0.70	-0.2
1,328,682	-		HGI48_RS06250	0.70	-0.7
1,328,682	-		HGI48_RS06250	0.70	-0.3
1,328,683	+		HGI48_RS06250	0.70	+1.0
1,328,683	+		HGI48_RS06250	0.70	-1.0
1,328,683	+		HGI48_RS06250	0.70	-0.7
1,328,684	-				+0.7
1,328,684	-				-1.3
1,329,179	-		HGI48_RS06255	0.40	-0.6
1,329,182	+		HGI48_RS06255	0.40	-1.5
1,329,182	+		HGI48_RS06255	0.40	-0.6
1,329,182	+		HGI48_RS06255	0.40	+0.0
1,329,183	-		HGI48_RS06255	0.40	-1.0
1,329,183	-		HGI48_RS06255	0.40	+0.7
1,329,183	-				-1.3
1,329,183	-		HGI48_RS06255	0.40	-0.3
1,329,183	-		HGI48_RS06255	0.40	+0.7
1,329,183	-				-1.3
1,329,302	+		HGI48_RS06255	0.57	+1.1
1,329,337	+		HGI48_RS06255	0.61	-0.1
1,329,488	+		HGI48_RS06255	0.82	-0.7
1,329,638	+				+0.3
1,329,639	-				-0.3
1,329,669	+				-1.7
1,329,706	+		HGI48_RS06260	0.13	+0.7
1,329,774	-		HGI48_RS06260	0.23	-0.3
1,329,774	-		HGI48_RS06260	0.23	+0.8
1,329,774	-		HGI48_RS06260	0.23	-0.5
1,329,774	-		HGI48_RS06260	0.23	-0.4
1,329,774	-		HGI48_RS06260	0.23	+0.6
1,329,774	-		HGI48_RS06260	0.23	+0.5
1,329,787	-		HGI48_RS06260	0.25	-0.3
1,329,804	+		HGI48_RS06260	0.28	-0.1