Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06085

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,297,274	+		HGI48_RS06080	0.36	+0.2
1,297,275	-		HGI48_RS06080	0.36	+0.2
1,297,275	-		HGI48_RS06080	0.36	+1.5
1,297,286	+		HGI48_RS06080	0.37	-2.0
1,297,286	+				+1.7
1,297,287	-		HGI48_RS06080	0.37	+0.8
1,297,316	-		HGI48_RS06080	0.39	-0.7
1,297,384	-		HGI48_RS06080	0.44	+0.6
1,297,384	-		HGI48_RS06080	0.44	+0.2
1,297,384	-		HGI48_RS06080	0.44	-1.0
1,297,384	-		HGI48_RS06080	0.44	-1.0
1,297,462	-		HGI48_RS06080	0.50	-1.7
1,297,462	-		HGI48_RS06080	0.50	-0.6
1,297,662	-		HGI48_RS06080	0.66	+0.2
1,297,668	+		HGI48_RS06080	0.66	-0.9
1,297,668	+		HGI48_RS06080	0.66	+1.2
1,297,668	+		HGI48_RS06080	0.66	+1.5
1,297,668	+		HGI48_RS06080	0.66	+0.9
1,297,668	+		HGI48_RS06080	0.66	+0.7
1,297,668	+		HGI48_RS06080	0.66	+0.3
1,297,669	-		HGI48_RS06080	0.66	-0.7
1,297,669	-		HGI48_RS06080	0.66	+0.0
1,297,669	-		HGI48_RS06080	0.66	-2.0
1,297,708	-		HGI48_RS06080	0.69	-0.8
1,297,884	+				+0.3
1,297,884	+		HGI48_RS06080	0.83	-0.8
1,297,884	+		HGI48_RS06080	0.83	+1.8
1,297,885	-		HGI48_RS06080	0.83	-1.5
1,298,059	+				+2.3
1,298,068	+				-0.0
1,298,069	-				-0.9
1,298,069	-				-1.0
1,298,069	-				-0.0
1,298,069	-				-0.1
1,298,104	-				-0.3
1,298,117	+				+0.5
1,298,117	+				+0.1
1,298,117	+				+0.3
1,298,117	+				-1.4
1,298,117	+				+0.6
1,298,118	-				+0.5
1,298,130	+				-0.7
1,298,130	+				-1.7
1,298,131	-				-0.9
1,298,131	-				+0.9
1,298,136	+				-0.3
1,298,206	+				+0.8
1,298,207	-				+1.3
1,298,212	-				-1.2
1,298,273	-				-0.7
1,298,286	+				-0.4
1,298,386	-		HGI48_RS06085	0.20	-2.2
1,298,386	-				-0.7
1,298,391	+		HGI48_RS06085	0.20	-0.7
1,298,392	-		HGI48_RS06085	0.20	-1.6
1,298,502	+		HGI48_RS06085	0.36	+0.3
1,298,548	+				-0.7
1,298,686	+				+0.3
1,298,913	-				-0.2
1,298,913	-				-2.1
1,298,972	+				+0.7
1,299,120	+		HGI48_RS06090	0.44	+0.3
1,299,120	+		HGI48_RS06090	0.44	+0.3
1,299,120	+		HGI48_RS06090	0.44	+0.0
1,299,121	-				+0.3
1,299,217	+				+2.2
1,299,256	-		HGI48_RS06090	0.82	-0.7
1,299,298	+				-0.9
1,299,298	+				+0.5
1,299,298	+				+0.1
1,299,299	-				-2.7
1,299,299	-				-1.2
1,299,299	-				+1.0
1,299,299	-				-0.7
1,299,302	+				+0.3
1,299,302	+				-1.0
1,299,302	+				+0.6
1,299,303	-				-0.8
1,299,303	-				-0.2
1,299,314	+				-1.1
1,299,419	-				-0.1
1,299,524	+		HGI48_RS06095	0.13	+0.6
1,299,524	+		HGI48_RS06095	0.13	+0.3
1,299,525	-		HGI48_RS06095	0.13	-0.2
1,299,526	+		HGI48_RS06095	0.13	+0.6
1,299,527	-		HGI48_RS06095	0.13	-1.7
1,299,527	-		HGI48_RS06095	0.13	-0.1
1,299,527	-				+0.3
1,299,527	-		HGI48_RS06095	0.13	+0.2
1,299,555	-		HGI48_RS06095	0.15	-0.7
1,299,588	+		HGI48_RS06095	0.17	-1.7
1,299,594	+		HGI48_RS06095	0.18	-1.0
1,299,594	+		HGI48_RS06095	0.18	-0.2
1,299,595	-		HGI48_RS06095	0.18	-1.2
1,299,595	-		HGI48_RS06095	0.18	-0.7
1,299,595	-		HGI48_RS06095	0.18	-0.8
1,299,595	-		HGI48_RS06095	0.18	-0.1
1,299,595	-		HGI48_RS06095	0.18	-1.2
1,299,804	-		HGI48_RS06095	0.32	-0.7
1,299,826	-		HGI48_RS06095	0.34	-0.5
1,299,826	-		HGI48_RS06095	0.34	+0.6
1,299,840	+		HGI48_RS06095	0.34	+1.2
1,299,945	+				-1.2
1,299,946	-		HGI48_RS06095	0.42	-2.7
1,299,946	-		HGI48_RS06095	0.42	+0.3
1,299,946	-		HGI48_RS06095	0.42	-1.8
1,299,949	+		HGI48_RS06095	0.42	-0.6
1,299,949	+		HGI48_RS06095	0.42	-2.0
1,299,950	-				+1.6
1,299,950	-		HGI48_RS06095	0.42	+0.9