Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06080

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,295,868	+				+0.8
1,295,868	+				-0.1
1,295,869	-				-1.2
1,295,869	-				+0.2
1,295,869	-				-0.2
1,295,869	-				+0.7
1,295,869	-				-0.7
1,295,924	+				+0.2
1,295,931	+				-0.9
1,295,931	+				+1.1
1,295,931	+				-1.2
1,295,931	+				-0.7
1,295,932	-				-0.7
1,295,932	-				+0.6
1,295,932	-				-0.2
1,295,932	-				+0.1
1,295,948	+				-0.5
1,295,950	+				-0.7
1,296,038	+				+0.0
1,296,039	-				+0.5
1,296,039	-				+0.2
1,296,039	-				+0.7
1,296,039	-				+0.3
1,296,120	+				-1.2
1,296,198	-		HGI48_RS06075	0.32	+0.1
1,296,303	+		HGI48_RS06075	0.48	+0.2
1,296,304	-		HGI48_RS06075	0.48	+1.4
1,296,425	+				+0.8
1,296,535	-		HGI48_RS06075	0.85	+0.1
1,296,535	-		HGI48_RS06075	0.85	-1.2
1,296,535	-		HGI48_RS06075	0.85	+0.2
1,296,574	-				+0.5
1,296,574	-				+0.3
1,296,574	-				-0.5
1,296,574	-				-1.7
1,296,791	+				+0.3
1,296,791	+				+1.3
1,296,975	+		HGI48_RS06080	0.13	-0.1
1,296,989	+		HGI48_RS06080	0.14	-0.5
1,296,989	+				+0.3
1,296,990	-		HGI48_RS06080	0.14	-1.3
1,296,990	-		HGI48_RS06080	0.14	-0.9
1,296,990	-		HGI48_RS06080	0.14	+0.3
1,297,008	+		HGI48_RS06080	0.15	-0.9
1,297,008	+		HGI48_RS06080	0.15	-0.2
1,297,009	-				+0.3
1,297,009	-		HGI48_RS06080	0.16	-0.8
1,297,052	-		HGI48_RS06080	0.19	+1.3
1,297,052	-		HGI48_RS06080	0.19	+0.3
1,297,065	+		HGI48_RS06080	0.20	+0.8
1,297,066	-		HGI48_RS06080	0.20	-0.4
1,297,274	+		HGI48_RS06080	0.36	+0.2
1,297,275	-		HGI48_RS06080	0.36	+0.2
1,297,275	-		HGI48_RS06080	0.36	+1.5
1,297,286	+		HGI48_RS06080	0.37	-2.0
1,297,286	+				+1.7
1,297,287	-		HGI48_RS06080	0.37	+0.8
1,297,316	-		HGI48_RS06080	0.39	-0.7
1,297,384	-		HGI48_RS06080	0.44	+0.6
1,297,384	-		HGI48_RS06080	0.44	+0.2
1,297,384	-		HGI48_RS06080	0.44	-1.0
1,297,384	-		HGI48_RS06080	0.44	-1.0
1,297,462	-		HGI48_RS06080	0.50	-1.7
1,297,462	-		HGI48_RS06080	0.50	-0.6
1,297,662	-		HGI48_RS06080	0.66	+0.2
1,297,668	+		HGI48_RS06080	0.66	-0.9
1,297,668	+		HGI48_RS06080	0.66	+1.2
1,297,668	+		HGI48_RS06080	0.66	+1.5
1,297,668	+		HGI48_RS06080	0.66	+0.9
1,297,668	+		HGI48_RS06080	0.66	+0.7
1,297,668	+		HGI48_RS06080	0.66	+0.3
1,297,669	-		HGI48_RS06080	0.66	-0.7
1,297,669	-		HGI48_RS06080	0.66	+0.0
1,297,669	-		HGI48_RS06080	0.66	-2.0
1,297,708	-		HGI48_RS06080	0.69	-0.8
1,297,884	+				+0.3
1,297,884	+		HGI48_RS06080	0.83	-0.8
1,297,884	+		HGI48_RS06080	0.83	+1.8
1,297,885	-		HGI48_RS06080	0.83	-1.5
1,298,059	+				+2.3
1,298,068	+				-0.0
1,298,069	-				-0.9
1,298,069	-				-1.0
1,298,069	-				-0.0
1,298,069	-				-0.1
1,298,104	-				-0.3
1,298,117	+				+0.5
1,298,117	+				+0.1
1,298,117	+				+0.3
1,298,117	+				-1.4
1,298,117	+				+0.6
1,298,118	-				+0.5
1,298,130	+				-0.7
1,298,130	+				-1.7
1,298,131	-				-0.9
1,298,131	-				+0.9
1,298,136	+				-0.3
1,298,206	+				+0.8
1,298,207	-				+1.3
1,298,212	-				-1.2
1,298,273	-				-0.7
1,298,286	+				-0.4
1,298,386	-		HGI48_RS06085	0.20	-2.2
1,298,386	-				-0.7
1,298,391	+		HGI48_RS06085	0.20	-0.7
1,298,392	-		HGI48_RS06085	0.20	-1.6
1,298,502	+		HGI48_RS06085	0.36	+0.3
1,298,548	+				-0.7
1,298,686	+				+0.3
1,298,913	-				-0.2
1,298,913	-				-2.1
1,298,972	+				+0.7