Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05685

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,197,141	+				+0.8
1,197,455	-		HGI48_RS05680	0.87	-0.6
1,197,481	+		HGI48_RS05680	0.89	+0.2
1,197,481	+		HGI48_RS05680	0.89	+1.1
1,197,481	+		HGI48_RS05680	0.89	-0.8
1,197,485	-		HGI48_RS05680	0.89	-1.0
1,197,588	+				+1.0
1,197,589	-				-0.6
1,197,645	-				+1.5
1,197,645	-				-1.9
1,197,645	-				+0.9
1,197,645	-				+0.8
1,197,745	+				+0.4
1,197,745	+				-1.0
1,197,746	-				+0.6
1,197,746	-				-0.1
1,197,746	-				+0.3
1,197,761	-				+1.8
1,197,761	-				-1.4
1,197,766	+				+0.6
1,197,776	-				+0.4
1,197,781	+				-1.1
1,197,782	-				+0.4
1,197,782	-				+0.1
1,197,796	+				+0.4
1,197,797	-				+2.0
1,197,797	-				-0.3
1,197,797	-				+0.4
1,197,877	+				-2.9
1,197,877	+				-1.9
1,197,877	+				-1.3
1,197,877	+				+0.1
1,197,877	+				+0.0
1,197,877	+				-0.2
1,197,878	-				+0.7
1,197,878	-				-0.5
1,197,878	-				-0.5
1,197,878	-				+1.5
1,197,974	+				-1.2
1,198,281	+		HGI48_RS05685	0.35	+0.7
1,198,293	-				-1.2
1,198,377	-		HGI48_RS05685	0.50	-0.0
1,198,671	-				-1.2
1,198,766	+				-0.3
1,198,766	+				-1.9
1,198,793	+				-1.1
1,198,915	-				-2.4
1,198,944	-		HGI48_RS05690	0.10	+0.7
1,199,040	+		HGI48_RS05690	0.18	-0.6
1,199,041	-		HGI48_RS05690	0.18	-0.6
1,199,041	-		HGI48_RS05690	0.18	+1.1
1,199,115	-				-1.2
1,199,158	+		HGI48_RS05690	0.27	+0.4
1,199,159	-		HGI48_RS05690	0.27	+0.4
1,199,269	-		HGI48_RS05690	0.36	+0.2
1,199,269	-				+0.4
1,199,355	+		HGI48_RS05690	0.43	-1.6
1,199,356	-		HGI48_RS05690	0.43	-1.0