Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05650

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,188,229	+		HGI48_RS05640	0.29	-0.9
1,188,229	+		HGI48_RS05640	0.29	+0.4
1,188,229	+		HGI48_RS05640	0.29	+1.1
1,188,230	-		HGI48_RS05640	0.29	+0.8
1,188,484	+		HGI48_RS05640	0.58	-0.6
1,188,505	+		HGI48_RS05640	0.60	-1.2
1,188,559	+				-0.6
1,188,598	+		HGI48_RS05640	0.70	-1.9
1,188,750	+		HGI48_RS05640	0.88	+0.1
1,188,750	+		HGI48_RS05640	0.88	-0.4
1,188,821	+				+0.7
1,188,847	+				+1.0
1,188,847	+				-1.4
1,188,848	-				-1.2
1,188,865	+				-1.9
1,188,866	-				-1.2
1,189,017	-				-1.2
1,189,211	-				+0.2
1,189,211	-				-2.4
1,189,228	+				-2.6
1,189,228	+				-0.7
1,189,472	-		HGI48_RS05650	0.43	-0.5
1,189,577	-		HGI48_RS05650	0.60	-0.6
1,189,577	-		HGI48_RS05650	0.60	+0.6
1,189,583	+		HGI48_RS05650	0.61	-2.2
1,189,729	+		HGI48_RS05650	0.85	-0.6
1,189,729	+		HGI48_RS05650	0.85	-0.4
1,189,811	+				-0.6
1,189,895	+				+0.1
1,189,895	+				+0.1
1,189,895	+				-0.4
1,189,895	+				+0.9
1,189,896	-				-0.2
1,189,896	-				+0.2
1,189,896	-				-1.7
1,189,896	-				-1.1
1,190,390	+		HGI48_RS05655	0.29	-0.8
1,190,390	+		HGI48_RS05655	0.29	+1.4
1,190,619	+		HGI48_RS05655	0.40	-2.4
1,190,693	+				-1.2
1,190,693	+		HGI48_RS05655	0.44	-1.6
1,190,743	-		HGI48_RS05655	0.47	-1.6