Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05525

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,162,447	-				-0.6
1,162,458	+				+0.0
1,162,459	-				+0.0
1,162,462	+				-0.3
1,162,463	-				-0.8
1,162,463	-				+0.4
1,162,464	+				-0.6
1,162,464	+				-0.2
1,162,464	+				+0.9
1,162,465	-				+2.0
1,162,465	-				+0.4
1,162,465	-				-1.0
1,162,469	-				-1.1
1,162,512	+				-0.0
1,162,513	-				-0.6
1,162,539	-				-0.2
1,162,642	+				+1.0
1,162,643	-				+1.4
1,162,643	-				+0.6
1,162,643	-				-0.7
1,162,643	-				-0.4
1,162,651	-		HGI48_RS05520	0.11	+0.3
1,162,651	-		HGI48_RS05520	0.11	-0.3
1,162,683	+		HGI48_RS05520	0.16	-0.6
1,162,683	+				-0.2
1,162,815	+		HGI48_RS05520	0.38	-0.4
1,162,816	-		HGI48_RS05520	0.38	-1.4
1,162,818	+		HGI48_RS05520	0.38	+1.0
1,162,818	+		HGI48_RS05520	0.38	+0.5
1,162,818	+		HGI48_RS05520	0.38	+1.1
1,162,819	-		HGI48_RS05520	0.38	-1.9
1,162,819	-		HGI48_RS05520	0.38	-0.4
1,162,819	-		HGI48_RS05520	0.38	+0.3
1,162,822	+				+0.8
1,162,822	+		HGI48_RS05520	0.39	-1.5
1,162,822	+		HGI48_RS05520	0.39	-0.2
1,162,823	-				-0.2
1,162,823	-		HGI48_RS05520	0.39	+0.7
1,162,823	-		HGI48_RS05520	0.39	-1.0
1,162,969	+		HGI48_RS05520	0.63	-0.2
1,162,969	+		HGI48_RS05520	0.63	-1.6
1,162,970	-		HGI48_RS05520	0.63	-0.0
1,163,092	-		HGI48_RS05520	0.83	-1.0
1,163,228	-				-1.2
1,163,228	-				+1.0
1,163,228	-				+0.1
1,163,243	+				-1.8
1,163,243	+				-2.2
1,163,243	+				+0.4
1,163,243	+				+2.7
1,163,243	+				+0.1
1,163,243	+				-0.5
1,163,243	+				+0.1
1,163,244	-				-1.2
1,163,244	-				-0.8
1,163,244	-				-0.2
1,163,244	-				+1.1
1,163,244	-				+0.4
1,163,244	-				-3.1
1,163,244	-				-0.1
1,163,244	-				-0.8
1,163,246	-				-1.6
1,163,272	+				+0.4
1,163,273	-				-0.8
1,163,301	+				+0.2
1,163,306	+				-1.4
1,163,307	-				-0.3
1,163,307	-				-0.5
1,163,414	+				-2.9
1,163,415	-				-0.0
1,163,415	-				-0.5
1,163,496	+		HGI48_RS05525	0.13	-2.4
1,163,496	+		HGI48_RS05525	0.13	+0.9
1,163,497	-		HGI48_RS05525	0.13	-2.2
1,163,598	-				-1.2
1,163,790	+		HGI48_RS05525	0.41	-1.2
1,163,791	-		HGI48_RS05525	0.41	-0.6
1,163,791	-		HGI48_RS05525	0.41	+0.5
1,163,806	+		HGI48_RS05525	0.42	-0.9
1,163,807	-		HGI48_RS05525	0.43	-0.4
1,163,807	-		HGI48_RS05525	0.43	+0.1
1,163,807	-		HGI48_RS05525	0.43	-1.9
1,163,807	-		HGI48_RS05525	0.43	-0.7
1,163,857	+		HGI48_RS05525	0.47	-0.0
1,163,983	-		HGI48_RS05525	0.59	+0.2
1,164,038	-		HGI48_RS05525	0.64	-0.3
1,164,196	-		HGI48_RS05525	0.79	-1.3
1,164,202	-		HGI48_RS05525	0.79	-0.2
1,164,202	-		HGI48_RS05525	0.79	-0.9
1,164,220	+		HGI48_RS05525	0.81	-1.0
1,164,277	-		HGI48_RS05525	0.87	+1.5
1,164,277	-		HGI48_RS05525	0.87	+0.7
1,164,277	-		HGI48_RS05525	0.87	-1.6
1,164,309	+		HGI48_RS05525	0.90	-0.4
1,164,310	-		HGI48_RS05525	0.90	-0.8
1,164,310	-		HGI48_RS05525	0.90	+0.3
1,164,310	-		HGI48_RS05525	0.90	+0.1
1,164,310	-		HGI48_RS05525	0.90	-0.0
1,164,473	-				-0.0
1,164,473	-				-0.4
1,164,474	+				-0.1
1,164,474	+				-2.6
1,164,474	+				+0.4
1,164,475	-				-2.4
1,164,475	-				-1.4
1,164,475	-				+0.4
1,164,475	-				+1.6
1,164,475	-				-0.5
1,164,604	-				-2.2
1,164,619	+				-2.9
1,164,753	+		HGI48_RS05530	0.20	-0.9
1,164,805	-		HGI48_RS05530	0.25	-1.4
1,164,843	-		HGI48_RS05530	0.28	-0.1
1,164,873	+		HGI48_RS05530	0.31	+1.8
1,164,958	+		HGI48_RS05530	0.38	-2.2
1,165,043	+		HGI48_RS05530	0.46	-3.2
1,165,043	+		HGI48_RS05530	0.46	+0.1
1,165,043	+		HGI48_RS05530	0.46	-0.6
1,165,044	-				-0.6