Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21665

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,833,048	+				+2.8
4,833,049	-		HGI48_RS21655	0.28	-1.3
4,833,110	-		HGI48_RS21655	0.43	-1.0
4,833,135	+		HGI48_RS21655	0.49	-1.5
4,833,158	+		HGI48_RS21655	0.55	-1.3
4,833,276	+		HGI48_RS21655	0.85	-2.2
4,833,287	+				+1.0
4,833,287	+				+1.6
4,833,369	+				-0.9
4,833,370	-				-0.4
4,833,370	-				+1.8
4,833,434	+				-0.1
4,833,442	+				-0.1
4,833,442	+				+0.8
4,833,442	+				-1.6
4,833,442	+				+0.6
4,833,442	+				-1.6
4,833,442	+				+0.6
4,833,442	+				-0.9
4,833,442	+				+0.0
4,833,442	+				-1.5
4,833,442	+				-0.5
4,833,442	+				+1.0
4,833,442	+				-0.7
4,833,443	-				-1.3
4,833,443	-				+1.5
4,833,443	-				-0.4
4,833,443	-				+0.3
4,833,443	-				-1.3
4,833,443	-				+0.6
4,833,443	-				-1.5
4,833,443	-				-1.3
4,833,443	-				+0.0
4,833,443	-				+0.2
4,833,443	-				-0.3
4,833,443	-				-0.6
4,833,447	-				+1.2
4,833,447	-				+0.2
4,833,447	-				+0.4
4,833,510	+		HGI48_RS21660	0.15	-1.6
4,833,510	+		HGI48_RS21660	0.15	-0.1
4,833,510	+		HGI48_RS21660	0.15	+0.0
4,833,540	-		HGI48_RS21660	0.21	-1.0
4,833,648	+		HGI48_RS21660	0.44	+0.6
4,833,648	+		HGI48_RS21660	0.44	-0.1
4,833,649	-		HGI48_RS21660	0.44	-1.6
4,833,678	+		HGI48_RS21660	0.50	-1.2
4,833,679	-		HGI48_RS21660	0.50	-1.3
4,833,693	+		HGI48_RS21660	0.53	-0.1
4,833,693	+				+2.0
4,833,693	+		HGI48_RS21660	0.53	-0.8
4,833,693	+				+1.4
4,833,694	-		HGI48_RS21660	0.53	-1.4
4,833,694	-		HGI48_RS21660	0.53	-0.9
4,833,697	+		HGI48_RS21660	0.54	-0.2
4,833,744	+		HGI48_RS21660	0.63	-0.1
4,833,744	+				+0.0
4,833,744	+		HGI48_RS21660	0.63	-1.6
4,833,744	+		HGI48_RS21660	0.63	-0.7
4,833,744	+		HGI48_RS21660	0.63	-2.3
4,833,744	+		HGI48_RS21660	0.63	-0.6
4,833,744	+		HGI48_RS21660	0.63	-0.3
4,833,744	+		HGI48_RS21660	0.63	+0.3
4,833,744	+		HGI48_RS21660	0.63	+0.9
4,833,744	+		HGI48_RS21660	0.63	-0.6
4,833,744	+		HGI48_RS21660	0.63	-0.2
4,833,744	+		HGI48_RS21660	0.63	-0.6
4,833,745	-		HGI48_RS21660	0.63	+0.7
4,833,745	-		HGI48_RS21660	0.63	-1.7
4,833,745	-		HGI48_RS21660	0.63	-0.2
4,833,745	-		HGI48_RS21660	0.63	+0.0
4,833,745	-		HGI48_RS21660	0.63	+1.0
4,833,745	-		HGI48_RS21660	0.63	-0.4
4,833,745	-		HGI48_RS21660	0.63	+0.7
4,833,745	-		HGI48_RS21660	0.63	+0.6
4,833,746	+		HGI48_RS21660	0.64	-0.4
4,833,746	+		HGI48_RS21660	0.64	+0.5
4,833,746	+		HGI48_RS21660	0.64	-1.8
4,833,746	+				-0.6
4,833,746	+		HGI48_RS21660	0.64	-0.1
4,833,746	+				-0.6
4,833,747	-		HGI48_RS21660	0.64	-1.0
4,833,747	-				+1.4
4,833,747	-		HGI48_RS21660	0.64	+0.5
4,833,747	-		HGI48_RS21660	0.64	-0.8
4,833,921	+				-1.0
4,833,921	+				+0.0
4,833,921	+				-1.0
4,833,929	-				+0.3
4,833,981	-				+0.0
4,834,115	+		HGI48_RS21665	0.17	-0.9
4,834,199	-		HGI48_RS21665	0.25	+0.2
4,834,201	+		HGI48_RS21665	0.25	+0.2
4,834,201	+		HGI48_RS21665	0.25	-1.6
4,834,201	+		HGI48_RS21665	0.25	+0.8
4,834,201	+		HGI48_RS21665	0.25	+1.0
4,834,201	+		HGI48_RS21665	0.25	-0.6
4,834,202	-		HGI48_RS21665	0.25	-1.2
4,834,202	-		HGI48_RS21665	0.25	-0.2
4,834,202	-		HGI48_RS21665	0.25	+0.2
4,834,202	-		HGI48_RS21665	0.25	-0.9
4,834,246	-		HGI48_RS21665	0.29	-1.6
4,834,310	+		HGI48_RS21665	0.35	-1.0
4,834,311	-		HGI48_RS21665	0.35	-1.3
4,834,422	-		HGI48_RS21665	0.46	-0.3
4,834,424	-		HGI48_RS21665	0.46	+0.2
4,834,477	+		HGI48_RS21665	0.51	+0.0
4,834,477	+		HGI48_RS21665	0.51	-0.2
4,834,692	+		HGI48_RS21665	0.70	-1.0
4,834,693	-		HGI48_RS21665	0.71	-0.4
4,834,738	+		HGI48_RS21665	0.75	+0.2
4,834,738	+		HGI48_RS21665	0.75	-1.0
4,834,762	+		HGI48_RS21665	0.77	+0.0
4,834,762	+		HGI48_RS21665	0.77	+0.4
4,834,801	-		HGI48_RS21665	0.80	-0.5
4,834,829	+		HGI48_RS21665	0.83	-0.2
4,834,830	-		HGI48_RS21665	0.83	-1.8
4,834,830	-				+0.0
4,834,832	+		HGI48_RS21665	0.83	-0.1
4,834,904	+				-0.6
4,834,905	-				-1.8
4,834,905	-				-0.6
4,834,905	-				+0.0
4,834,924	-				+0.2
4,835,012	+				-0.7
4,835,016	-				+0.0
4,835,062	+				-0.2
4,835,065	-				+0.0
4,835,156	-				+0.0
4,835,162	-				+0.4
4,835,162	-				-0.2
4,835,164	+				-1.1
4,835,164	+				-0.2
4,835,184	-				-0.4
4,835,234	+				-1.3
4,835,279	-				-0.5
4,835,294	-				+0.5
4,835,382	+				+0.2
4,835,594	+				-0.6
4,835,599	-		HGI48_RS21670	0.34	-0.4
4,835,698	-		HGI48_RS21670	0.47	+0.7
4,835,738	+		HGI48_RS21670	0.52	-0.2
4,835,739	-		HGI48_RS21670	0.53	+0.7
4,835,739	-		HGI48_RS21670	0.53	-0.8
4,835,782	+		HGI48_RS21670	0.58	+0.6
4,835,803	+		HGI48_RS21670	0.61	+0.3
4,835,803	+		HGI48_RS21670	0.61	-1.6
4,835,858	-		HGI48_RS21670	0.68	+0.8
4,835,858	-		HGI48_RS21670	0.68	-1.0
4,835,858	-		HGI48_RS21670	0.68	+0.4
4,835,909	+		HGI48_RS21670	0.75	-0.6
4,835,910	-		HGI48_RS21670	0.75	+0.0