Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21225

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,736,901	+		HGI48_RS21220	0.71	-0.2
4,736,940	-		HGI48_RS21220	0.73	-1.0
4,736,940	-				+1.0
4,737,145	+		HGI48_RS21220	0.84	-1.7
4,737,145	+		HGI48_RS21220	0.84	-2.2
4,737,339	+				-1.6
4,737,400	-				-0.9
4,737,450	-				+0.4
4,737,468	+				-0.6
4,737,469	-				-0.5
4,737,469	-				+0.0
4,737,474	+				-3.2
4,737,474	+				-0.2
4,737,474	+				+0.6
4,737,474	+				+0.0
4,737,474	+				-1.6
4,737,474	+				-1.6
4,737,474	+				+0.0
4,737,475	-				+0.3
4,737,475	-				+0.4
4,737,475	-				+2.0
4,737,477	+				-0.5
4,737,561	-				+0.0
4,737,561	-				-0.2
4,737,561	-				-0.9
4,737,561	-				+0.2
4,737,593	+				+1.0
4,737,639	+				+0.6
4,737,639	+				-1.6
4,737,640	-				-0.5
4,737,640	-				-2.4
4,737,687	+				+0.4
4,737,688	-				+0.3
4,737,688	-				-1.3
4,737,688	-				-2.3
4,737,688	-				+0.8
4,737,699	+				-0.6
4,737,721	+				+0.7
4,737,721	+				-1.8
4,737,723	+				+1.0
4,737,732	+				+1.0
4,737,810	+				+1.2
4,738,523	+		HGI48_RS21225	0.51	-1.3
4,738,524	-				+2.2
4,738,535	-				+1.0
4,738,618	+				+1.6
4,738,619	-				+1.4
4,738,694	+		HGI48_RS21225	0.63	+0.6
4,738,761	-		HGI48_RS21225	0.68	-1.8
4,739,129	+				+0.4
4,739,210	+				+0.1
4,739,210	+				-0.6
4,739,210	+				-0.4
4,739,210	+				-1.3
4,739,210	+				+1.1
4,739,210	+				-0.3
4,739,254	-				+0.6
4,739,254	-				+0.3
4,739,254	-				-2.6
4,739,254	-				+0.3
4,739,282	-				-1.8
4,739,288	-				-0.8
4,739,353	+				-0.4
4,739,353	+				-0.4
4,739,353	+				-0.3
4,739,353	+				+0.6
4,739,353	+				-0.2
4,739,353	+				+1.0
4,739,354	-				+0.4
4,739,354	-				+1.0
4,739,354	-				-1.3
4,739,362	+				-0.6
4,739,363	-				-0.6
4,739,363	-				-1.3
4,739,366	+				-0.6
4,739,366	+				+1.3
4,739,367	-				-0.2
4,739,367	-				-0.6
4,739,367	-				-1.0
4,739,371	+				-1.3
4,739,383	+				-0.4
4,739,386	+				-0.6
4,739,386	+				+0.6
4,739,387	-				+0.4
4,739,387	-				-0.2
4,739,478	+				-0.4
4,739,507	+				-0.2
4,739,659	+		HGI48_RS21230	0.23	-0.5
4,739,659	+		HGI48_RS21230	0.23	+0.6
4,739,659	+		HGI48_RS21230	0.23	+0.5
4,739,659	+		HGI48_RS21230	0.23	-1.6
4,739,670	+		HGI48_RS21230	0.24	-1.3
4,739,670	+		HGI48_RS21230	0.24	-0.5
4,739,670	+		HGI48_RS21230	0.24	-2.0
4,739,670	+		HGI48_RS21230	0.24	-2.2
4,739,670	+		HGI48_RS21230	0.24	-0.1
4,739,686	+		HGI48_RS21230	0.26	-0.5
4,739,686	+		HGI48_RS21230	0.26	-1.6
4,739,686	+				-0.6
4,739,686	+		HGI48_RS21230	0.26	-0.2
4,739,686	+				-0.6
4,739,686	+		HGI48_RS21230	0.26	+1.6
4,739,686	+		HGI48_RS21230	0.26	-1.3
4,739,686	+		HGI48_RS21230	0.26	+0.0
4,739,686	+				-0.6
4,739,687	-		HGI48_RS21230	0.26	-2.4
4,739,687	-		HGI48_RS21230	0.26	+1.7
4,739,687	-		HGI48_RS21230	0.26	-0.7
4,739,687	-		HGI48_RS21230	0.26	-1.6
4,739,915	+		HGI48_RS21230	0.47	-0.3
4,739,915	+		HGI48_RS21230	0.47	-0.4
4,739,915	+		HGI48_RS21230	0.47	-0.6
4,739,915	+		HGI48_RS21230	0.47	-0.6
4,739,916	-		HGI48_RS21230	0.48	-0.8
4,739,916	-		HGI48_RS21230	0.48	-1.0
4,739,916	-		HGI48_RS21230	0.48	-0.8
4,739,954	-		HGI48_RS21230	0.51	+1.6
4,740,033	+				+1.0
4,740,034	-		HGI48_RS21230	0.59	-0.3
4,740,129	+		HGI48_RS21230	0.68	-1.0
4,740,129	+		HGI48_RS21230	0.68	-1.2
4,740,129	+		HGI48_RS21230	0.68	+0.1
4,740,130	-		HGI48_RS21230	0.68	-1.8