Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,732,605	+		HGI48_RS21200	0.62	-1.3
4,732,606	-				+1.0
4,732,606	-		HGI48_RS21200	0.62	-0.3
4,732,697	+		HGI48_RS21200	0.67	-0.3
4,732,697	+		HGI48_RS21200	0.67	+1.4
4,732,698	-		HGI48_RS21200	0.67	+0.6
4,732,712	+		HGI48_RS21200	0.68	-0.7
4,732,713	-		HGI48_RS21200	0.68	-2.0
4,733,083	+		HGI48_RS21200	0.89	+0.6
4,733,083	+		HGI48_RS21200	0.89	+1.5
4,733,083	+		HGI48_RS21200	0.89	+1.3
4,733,083	+		HGI48_RS21200	0.89	+0.0
4,733,084	-		HGI48_RS21200	0.89	-0.6
4,733,084	-		HGI48_RS21200	0.89	-0.5
4,733,084	-		HGI48_RS21200	0.89	+0.4
4,733,084	-				+1.0
4,733,268	+				+0.0
4,733,284	+				+1.3
4,733,284	+				-0.8
4,733,285	-				-1.0
4,733,317	+				+2.6
4,733,317	+				+0.0
4,733,317	+				+0.0
4,733,317	+				+0.0
4,733,317	+				-0.1
4,733,317	+				-0.8
4,733,317	+				+0.0
4,733,317	+				-2.8
4,733,317	+				-0.5
4,733,317	+				-0.2
4,733,317	+				-1.3
4,733,318	-				-0.4
4,733,318	-				+0.8
4,733,318	-				-0.8
4,733,318	-				+1.0
4,733,318	-				+1.0
4,733,318	-				-1.1
4,733,318	-				-0.2
4,733,318	-				-0.2
4,733,318	-				+0.7
4,733,318	-				+0.4
4,733,318	-				+0.0
4,733,319	+				-0.4
4,733,320	-				+0.0
4,733,396	+				+0.0
4,733,396	+				-1.3
4,733,396	+				+0.1
4,733,396	+				+0.0
4,733,397	-				+0.6
4,733,397	-				+0.5
4,733,397	-				-0.6
4,733,397	-				+0.0
4,733,397	-				-0.1
4,733,397	-				-0.6
4,733,397	-				-0.2
4,733,397	-				-0.4
4,733,397	-				+0.7
4,733,400	+				+0.6
4,733,400	+				-0.6
4,733,400	+				+0.6
4,733,400	+				-0.5
4,733,400	+				+1.3
4,733,401	-				+0.4
4,733,577	+		HGI48_RS21205	0.26	-0.3
4,733,619	+		HGI48_RS21205	0.30	+0.2
4,733,674	-				+0.4
4,733,674	-		HGI48_RS21205	0.36	-2.6
4,733,674	-		HGI48_RS21205	0.36	-0.5
4,733,674	-		HGI48_RS21205	0.36	-2.4
4,733,674	-		HGI48_RS21205	0.36	-0.3
4,733,733	-				+0.4
4,733,850	+		HGI48_RS21205	0.55	-0.4
4,734,064	+		HGI48_RS21205	0.77	-0.3
4,734,065	-		HGI48_RS21205	0.77	+0.7
4,734,117	+		HGI48_RS21205	0.83	-1.8
4,734,117	+		HGI48_RS21205	0.83	-0.1
4,734,117	+		HGI48_RS21205	0.83	-0.2
4,734,162	-		HGI48_RS21205	0.88	+0.3
4,734,162	-		HGI48_RS21205	0.88	+0.0
4,734,201	+				+0.1
4,734,230	+				-0.7
4,734,230	+				-0.6
4,734,230	+				+0.4
4,734,230	+				+0.4
4,734,230	+				+0.0
4,734,230	+				-0.3
4,734,231	-				-1.0
4,734,231	-				-0.6
4,734,231	-				-0.5
4,734,231	-				-0.6
4,734,231	-				+0.0
4,734,231	-				+0.4
4,734,231	-				-0.6
4,734,269	+				-0.3
4,734,272	+				-0.2
4,734,272	+				-1.0
4,734,273	-				+1.5
4,734,273	-				+1.0
4,734,273	-				+1.0
4,734,273	-				+0.8
4,734,277	-				+0.8
4,734,296	+				-1.4
4,734,297	-				-0.8
4,734,297	-				+0.5
4,734,297	-				-2.3
4,734,297	-				-0.6
4,734,297	-				-1.6
4,734,297	-				-1.3
4,734,300	+				-1.6
4,734,300	+				-0.3
4,734,300	+				+0.8
4,734,300	+				-0.6
4,734,300	+				+0.2
4,734,300	+				+1.0
4,734,301	-				-1.4
4,734,301	-				+0.7
4,734,301	-				-0.6
4,734,301	-				-0.3
4,734,311	+				+0.5
4,734,311	+				-0.2
4,734,311	+				+0.0
4,734,311	+				-1.0
4,734,311	+				-0.2
4,734,311	+				+0.0
4,734,311	+				-1.0
4,734,312	-				+0.4
4,734,312	-				+0.3
4,734,312	-				+0.7
4,734,328	+				-0.2
4,734,329	-				+1.3
4,734,330	+				-0.6
4,734,331	-				-0.7
4,734,331	-				-0.7
4,734,331	-				-1.0
4,734,331	-				-0.2
4,734,372	+		HGI48_RS21210	0.10	+0.0
4,734,372	+		HGI48_RS21210	0.10	-1.8
4,734,373	-		HGI48_RS21210	0.11	+0.3
4,734,373	-		HGI48_RS21210	0.11	-0.4
4,734,373	-		HGI48_RS21210	0.11	-0.8
4,734,442	+		HGI48_RS21210	0.26	-0.2
4,734,442	+		HGI48_RS21210	0.26	-1.0
4,734,448	+		HGI48_RS21210	0.28	+0.7
4,734,527	+		HGI48_RS21210	0.46	-1.0
4,734,547	-				+1.0
4,734,547	-		HGI48_RS21210	0.50	-0.2
4,734,630	+		HGI48_RS21210	0.69	+0.8
4,734,631	-		HGI48_RS21210	0.69	-1.0
4,734,753	+				-0.1
4,734,753	+				-0.3
4,734,754	-				-0.3
4,734,764	+				-0.0
4,734,765	-				-0.5
4,734,773	+				-1.3
4,734,773	+				+0.0
4,734,773	+				-0.3
4,734,773	+				-0.3
4,734,774	-				-0.3
4,734,774	-				-0.6
4,734,786	+				-0.6
4,734,787	-				-0.5
4,734,787	-				+0.7
4,734,787	-				-0.4
4,734,817	+				-0.4
4,734,817	+				-0.2
4,734,818	-				-0.8
4,734,818	-				+0.7
4,734,818	-				-0.6
4,734,818	-				-1.0
4,734,818	-				+0.3
4,734,818	-				+1.0
4,734,944	+		HGI48_RS21215	0.28	+0.8
4,734,945	-		HGI48_RS21215	0.28	-0.6
4,734,989	+		HGI48_RS21215	0.35	-1.8
4,734,989	+		HGI48_RS21215	0.35	+1.2
4,734,990	-		HGI48_RS21215	0.36	-0.6
4,734,990	-		HGI48_RS21215	0.36	-1.0
4,734,990	-		HGI48_RS21215	0.36	-0.6
4,734,990	-		HGI48_RS21215	0.36	+0.0
4,735,060	-		HGI48_RS21215	0.47	-0.6
4,735,069	+		HGI48_RS21215	0.49	+0.0
4,735,069	+		HGI48_RS21215	0.49	+0.2
4,735,069	+				-0.6
4,735,069	+		HGI48_RS21215	0.49	+0.0
4,735,069	+		HGI48_RS21215	0.49	-3.1
4,735,069	+		HGI48_RS21215	0.49	-0.3
4,735,070	-		HGI48_RS21215	0.49	-0.4
4,735,070	-		HGI48_RS21215	0.49	-1.0
4,735,070	-		HGI48_RS21215	0.49	+0.5
4,735,070	-		HGI48_RS21215	0.49	-1.5
4,735,070	-		HGI48_RS21215	0.49	+0.8
4,735,070	-		HGI48_RS21215	0.49	+0.9
4,735,072	+		HGI48_RS21215	0.49	+0.7
4,735,072	+		HGI48_RS21215	0.49	+0.0
4,735,129	+		HGI48_RS21215	0.58	+0.4