Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21040

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,695,240	+		HGI48_RS21030	0.54	-0.0
4,695,278	-		HGI48_RS21030	0.56	-0.1
4,695,305	+		HGI48_RS21030	0.58	+1.0
4,695,305	+		HGI48_RS21030	0.58	+0.5
4,695,305	+		HGI48_RS21030	0.58	+1.2
4,695,305	+				-0.6
4,695,306	-		HGI48_RS21030	0.58	+0.0
4,695,306	-		HGI48_RS21030	0.58	+0.2
4,695,306	-		HGI48_RS21030	0.58	-0.4
4,695,333	+		HGI48_RS21030	0.60	+0.1
4,695,333	+		HGI48_RS21030	0.60	+0.0
4,695,333	+		HGI48_RS21030	0.60	-0.3
4,695,333	+		HGI48_RS21030	0.60	+0.3
4,695,333	+		HGI48_RS21030	0.60	+1.2
4,695,333	+		HGI48_RS21030	0.60	-0.6
4,695,333	+		HGI48_RS21030	0.60	+1.1
4,695,333	+		HGI48_RS21030	0.60	+0.0
4,695,333	+		HGI48_RS21030	0.60	-1.0
4,695,334	-		HGI48_RS21030	0.60	+0.0
4,695,334	-		HGI48_RS21030	0.60	+0.2
4,695,334	-		HGI48_RS21030	0.60	-0.1
4,695,334	-		HGI48_RS21030	0.60	-0.3
4,695,334	-		HGI48_RS21030	0.60	-0.3
4,695,334	-		HGI48_RS21030	0.60	+0.2
4,695,477	+		HGI48_RS21030	0.70	+1.0
4,695,477	+		HGI48_RS21030	0.70	-1.1
4,695,478	-		HGI48_RS21030	0.70	-0.2
4,695,478	-		HGI48_RS21030	0.70	-0.2
4,695,478	-		HGI48_RS21030	0.70	-0.1
4,695,502	-		HGI48_RS21030	0.72	-1.6
4,695,628	+		HGI48_RS21030	0.81	+1.7
4,695,628	+		HGI48_RS21030	0.81	-0.5
4,695,628	+		HGI48_RS21030	0.81	-0.3
4,695,628	+		HGI48_RS21030	0.81	+0.1
4,695,628	+		HGI48_RS21030	0.81	-0.5
4,695,629	-				+2.2
4,695,629	-		HGI48_RS21030	0.81	-1.6
4,695,629	-				+0.4
4,695,629	-				+1.0
4,695,629	-		HGI48_RS21030	0.81	-0.5
4,695,629	-		HGI48_RS21030	0.81	+0.3
4,695,629	-		HGI48_RS21030	0.81	-0.9
4,695,670	+		HGI48_RS21030	0.84	+0.0
4,695,671	-		HGI48_RS21030	0.84	-1.0
4,695,671	-		HGI48_RS21030	0.84	-0.3
4,695,704	+		HGI48_RS21030	0.86	-0.4
4,695,711	+		HGI48_RS21030	0.87	+0.0
4,695,712	-		HGI48_RS21030	0.87	+1.0
4,695,782	+				+1.6
4,695,783	-				-1.3
4,695,783	-				+0.6
4,695,860	+				+0.9
4,695,860	+				+1.6
4,695,861	-				+0.5
4,695,861	-				+1.0
4,695,861	-				-0.8
4,695,861	-				-0.3
4,695,863	+				-0.2
4,695,863	+				+0.5
4,695,863	+				+0.0
4,695,864	-				+0.0
4,695,881	+				+0.6
4,695,881	+				-0.8
4,695,882	-				-2.0
4,695,902	-				-1.3
4,696,023	-				+2.0
4,696,183	+				-0.4
4,696,183	+				-0.6
4,696,183	+				+0.4
4,696,184	-				-0.1
4,696,184	-				-0.5
4,696,184	-				+0.7
4,696,195	+				-0.4
4,696,196	-				-1.8
4,696,196	-				+0.0
4,696,196	-				+1.0
4,696,196	-				-0.4
4,696,196	-				-0.6
4,696,196	-				-0.1
4,696,196	-				-0.7
4,696,199	+				-1.3
4,696,200	-				+0.3
4,696,200	-				-0.2
4,696,200	-				-0.6
4,696,200	-				-1.3
4,696,242	+				-2.4
4,696,242	+				-0.3
4,696,242	+				+0.0
4,696,243	-				-1.4
4,696,243	-				-0.6
4,696,243	-				-0.6
4,696,243	-				+1.0
4,696,243	-				+0.9
4,696,417	+		HGI48_RS21040	0.68	+0.2
4,696,533	+				+0.6
4,696,533	+				-1.3
4,696,533	+				-0.2
4,696,533	+				+0.7
4,696,533	+				+2.6
4,696,533	+				+1.0
4,696,534	-				+0.4
4,696,534	-				+0.7
4,696,534	-				-1.6
4,696,534	-				-1.0
4,696,646	-				+1.3
4,696,941	+		HGI48_RS21045	0.28	+0.2
4,696,941	+		HGI48_RS21045	0.28	+1.0
4,696,941	+		HGI48_RS21045	0.28	+0.0
4,696,941	+		HGI48_RS21045	0.28	-1.0
4,696,942	-		HGI48_RS21045	0.28	+0.8
4,696,942	-		HGI48_RS21045	0.28	+0.2
4,697,149	+		HGI48_RS21045	0.52	+1.5
4,697,150	-		HGI48_RS21045	0.52	+0.4
4,697,152	+		HGI48_RS21045	0.52	+0.4
4,697,152	+		HGI48_RS21045	0.52	+0.7
4,697,152	+		HGI48_RS21045	0.52	-1.3
4,697,152	+		HGI48_RS21045	0.52	-0.3
4,697,152	+		HGI48_RS21045	0.52	-1.3
4,697,153	-		HGI48_RS21045	0.52	-0.2
4,697,153	-		HGI48_RS21045	0.52	+0.3
4,697,153	-		HGI48_RS21045	0.52	+0.3
4,697,153	-		HGI48_RS21045	0.52	-3.2
4,697,153	-				+1.4
4,697,153	-				-0.6
4,697,154	+		HGI48_RS21045	0.53	+1.0
4,697,154	+		HGI48_RS21045	0.53	+1.5
4,697,154	+		HGI48_RS21045	0.53	+0.0
4,697,154	+		HGI48_RS21045	0.53	+1.3
4,697,154	+		HGI48_RS21045	0.53	-0.5
4,697,155	-		HGI48_RS21045	0.53	-0.7
4,697,155	-		HGI48_RS21045	0.53	+0.3
4,697,155	-		HGI48_RS21045	0.53	-2.9
4,697,199	-		HGI48_RS21045	0.58	+1.3
4,697,212	+		HGI48_RS21045	0.59	-1.3
4,697,212	+		HGI48_RS21045	0.59	-0.1
4,697,213	-		HGI48_RS21045	0.59	-1.0
4,697,213	-		HGI48_RS21045	0.59	+0.2
4,697,213	-		HGI48_RS21045	0.59	+0.0
4,697,213	-		HGI48_RS21045	0.59	-0.2
4,697,213	-		HGI48_RS21045	0.59	-0.6
4,697,213	-				+2.2
4,697,370	+		HGI48_RS21045	0.78	+0.4
4,697,371	-		HGI48_RS21045	0.78	+1.0
4,697,461	+		HGI48_RS21045	0.88	-0.3
4,697,461	+		HGI48_RS21045	0.88	+1.8
4,697,461	+				+1.0
4,697,461	+		HGI48_RS21045	0.88	+0.2
4,697,462	-		HGI48_RS21045	0.88	-2.0
4,697,462	-		HGI48_RS21045	0.88	+0.7