Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,600,413	+				+0.4
4,600,453	+				-0.0
4,600,453	+				-1.1
4,600,454	-				+1.0
4,600,454	-				-0.3
4,600,454	-				-1.5
4,600,454	-				+1.0
4,600,461	+				-0.7
4,600,461	+				+1.0
4,600,461	+				-0.3
4,600,462	-				-1.5
4,600,462	-				+0.4
4,600,466	+				+0.3
4,600,466	+				+0.0
4,600,466	+				+0.2
4,600,466	+				-0.8
4,600,467	-				-0.3
4,600,467	-				+0.4
4,600,467	-				-1.6
4,600,474	+				+0.3
4,600,475	-				-0.1
4,600,475	-				-0.8
4,600,505	+				-1.1
4,600,506	-				-0.2
4,600,506	-				-2.0
4,600,529	+				-0.1
4,600,529	+				-1.4
4,600,529	+				-0.1
4,600,529	+				-0.6
4,600,530	-				-2.3
4,600,530	-				+0.3
4,600,535	+				+0.6
4,600,536	-				-0.3
4,600,536	-				-0.8
4,600,570	-				-0.4
4,600,576	-				+0.4
4,600,579	+				+0.0
4,600,603	+				-1.3
4,600,604	-				-2.0
4,600,604	-				+0.5
4,600,604	-				-0.8
4,600,604	-				+0.8
4,600,604	-				-1.0
4,600,610	+				+1.4
4,600,631	+				-0.8
4,600,750	-		HGI48_RS20595	0.16	-1.0
4,600,780	-				-0.6
4,600,789	+		HGI48_RS20595	0.22	-0.7
4,600,925	+		HGI48_RS20595	0.41	-1.3
4,601,133	-		HGI48_RS20595	0.71	-1.4
4,601,236	+				+1.4
4,601,236	+		HGI48_RS20595	0.86	-1.0
4,601,236	+		HGI48_RS20595	0.86	+0.3
4,601,236	+		HGI48_RS20595	0.86	-2.4
4,601,236	+		HGI48_RS20595	0.86	+0.3
4,601,236	+		HGI48_RS20595	0.86	-0.9
4,601,236	+		HGI48_RS20595	0.86	-1.6
4,601,236	+				-0.6
4,601,236	+		HGI48_RS20595	0.86	-1.3
4,601,237	-		HGI48_RS20595	0.86	+0.7
4,601,237	-		HGI48_RS20595	0.86	-2.2
4,601,237	-		HGI48_RS20595	0.86	-1.8
4,601,237	-		HGI48_RS20595	0.86	+0.0
4,601,237	-				+1.6
4,601,237	-				-0.6
4,601,237	-		HGI48_RS20595	0.86	+0.1
4,601,237	-				+1.0
4,601,237	-		HGI48_RS20595	0.86	-1.0
4,601,290	+				-1.4
4,601,290	+				+0.7
4,601,312	+				+0.0
4,601,313	-				-0.6
4,601,351	+				-0.6
4,601,351	+				-0.4
4,601,351	+				+0.4
4,601,351	+				+0.8
4,601,351	+				+0.4
4,601,351	+				-0.2
4,601,352	-				-2.0
4,601,546	-		HGI48_RS20600	0.14	-1.8
4,601,548	+		HGI48_RS20600	0.14	-1.0
4,601,549	-		HGI48_RS20600	0.14	+0.7
4,601,734	+		HGI48_RS20600	0.28	-1.3
4,601,735	-		HGI48_RS20600	0.28	-1.0
4,601,772	+		HGI48_RS20600	0.31	-1.4
4,601,772	+		HGI48_RS20600	0.31	-1.0
4,601,781	+		HGI48_RS20600	0.31	-2.3
4,601,781	+		HGI48_RS20600	0.31	-1.0
4,601,781	+				+1.4
4,601,782	-		HGI48_RS20600	0.31	-0.3
4,601,782	-		HGI48_RS20600	0.31	-0.2
4,601,782	-		HGI48_RS20600	0.31	-1.3
4,601,782	-		HGI48_RS20600	0.31	-0.4
4,601,820	-		HGI48_RS20600	0.34	+0.5
4,602,252	+				-0.6
4,602,252	+		HGI48_RS20600	0.66	+0.0
4,602,253	-		HGI48_RS20600	0.66	-2.4
4,602,253	-		HGI48_RS20600	0.66	-0.6
4,602,711	+				-1.0
4,602,711	+				+0.7
4,602,711	+				+1.0
4,602,879	-				-0.3
4,602,920	+				-1.7
4,602,920	+				+1.0
4,602,920	+				-0.2
4,602,920	+				-2.0
4,602,920	+				-0.6
4,602,921	-				-0.2
4,602,921	-				-0.8
4,603,005	+				+0.0
4,603,006	-				-1.6
4,603,006	-				-0.9
4,603,020	-				+1.0
4,603,039	-				-0.2
4,603,083	-				+0.2
4,603,144	+				+1.3
4,603,144	+				+0.3
4,603,145	-				-0.2
4,603,145	-				+1.2
4,603,145	-				-1.3
4,603,368	+		HGI48_RS20605	0.18	+0.1
4,603,368	+		HGI48_RS20605	0.18	-0.1
4,603,368	+		HGI48_RS20605	0.18	+0.5
4,603,368	+		HGI48_RS20605	0.18	+0.4
4,603,631	+		HGI48_RS20605	0.30	+0.2
4,603,632	-		HGI48_RS20605	0.30	-1.0
4,603,632	-		HGI48_RS20605	0.30	-0.6
4,603,715	+		HGI48_RS20605	0.34	-0.9
4,603,715	+		HGI48_RS20605	0.34	-1.3
4,603,716	-		HGI48_RS20605	0.34	-0.2
4,603,716	-		HGI48_RS20605	0.34	-0.4
4,603,717	+		HGI48_RS20605	0.34	+0.8
4,603,717	+		HGI48_RS20605	0.34	+1.0
4,603,717	+		HGI48_RS20605	0.34	-0.6
4,603,717	+		HGI48_RS20605	0.34	-1.0
4,603,717	+		HGI48_RS20605	0.34	-0.6
4,603,717	+		HGI48_RS20605	0.34	-0.6
4,603,717	+		HGI48_RS20605	0.34	+0.6
4,603,717	+		HGI48_RS20605	0.34	+1.4
4,603,717	+		HGI48_RS20605	0.34	-0.7
4,603,717	+		HGI48_RS20605	0.34	-0.3
4,603,717	+		HGI48_RS20605	0.34	-0.4
4,603,717	+		HGI48_RS20605	0.34	+1.2
4,603,718	-		HGI48_RS20605	0.34	+1.0
4,603,718	-		HGI48_RS20605	0.34	-0.6
4,603,718	-		HGI48_RS20605	0.34	-1.0
4,603,718	-		HGI48_RS20605	0.34	-0.2
4,603,718	-		HGI48_RS20605	0.34	+0.0
4,603,718	-		HGI48_RS20605	0.34	-1.6
4,603,718	-		HGI48_RS20605	0.34	-0.2
4,603,718	-		HGI48_RS20605	0.34	-1.6
4,603,718	-		HGI48_RS20605	0.34	-0.1