Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20510

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,583,208	+				+0.0
4,583,208	+				-0.0
4,583,208	+				+1.0
4,583,209	-				-0.6
4,583,243	-				+1.0
4,583,256	+				-0.7
4,583,257	-				-1.3
4,583,261	+				+0.0
4,583,262	-				-0.4
4,583,262	-				+0.4
4,583,262	-				-2.0
4,583,318	-				-0.6
4,583,339	+				-0.6
4,583,339	+				+0.0
4,583,349	+				-0.3
4,583,349	+				-0.3
4,583,352	+				-2.0
4,583,352	+				-1.3
4,583,353	-				-1.4
4,583,355	+				-1.0
4,583,355	+				-0.3
4,583,356	-				+0.3
4,583,408	+				-0.6
4,583,493	+		HGI48_RS20505	0.22	+0.5
4,583,493	+		HGI48_RS20505	0.22	+1.0
4,583,494	-		HGI48_RS20505	0.22	+0.4
4,583,494	-		HGI48_RS20505	0.22	-1.6
4,583,494	-		HGI48_RS20505	0.22	-0.9
4,583,513	+				+1.0
4,583,514	-				+1.0
4,583,530	+		HGI48_RS20505	0.28	+1.2
4,583,638	+				+1.6
4,583,638	+		HGI48_RS20505	0.46	-0.2
4,583,638	+		HGI48_RS20505	0.46	-0.2
4,583,639	-		HGI48_RS20505	0.46	-0.6
4,583,639	-		HGI48_RS20505	0.46	+0.3
4,583,670	+				+2.2
4,583,675	+		HGI48_RS20505	0.52	+1.2
4,583,691	+				+1.6
4,583,691	+		HGI48_RS20505	0.55	+0.4
4,583,692	-				-0.6
4,583,692	-		HGI48_RS20505	0.55	-2.0
4,583,778	+		HGI48_RS20505	0.70	+0.4
4,583,882	-		HGI48_RS20505	0.87	+0.9
4,583,939	+				-0.5
4,584,011	-				+0.7
4,584,011	-				+1.8
4,584,011	-				-1.3
4,584,012	+				+0.0
4,584,012	+				-2.0
4,584,012	+				-1.8
4,584,012	+				+0.2
4,584,012	+				-0.1
4,584,012	+				+0.4
4,584,013	-				+0.7
4,584,013	-				-0.6
4,584,013	-				-1.3
4,584,013	-				-2.4
4,584,013	-				-0.6
4,584,013	-				-0.2
4,584,013	-				-0.4
4,584,015	+				+0.6
4,584,016	-				-0.2
4,584,029	+				+0.4
4,584,064	+				+1.4
4,584,072	-				+0.6
4,584,072	-				-0.6
4,584,922	-				-0.6
4,584,977	+				-1.6
4,584,977	+				-0.3
4,584,978	-				-1.0
4,584,997	+				+2.3
4,584,997	+				-0.3
4,584,997	+				-0.9
4,584,997	+				-0.2
4,584,997	+				+0.5
4,584,997	+				+0.8
4,584,997	+				+0.0
4,584,998	-				+2.3
4,584,998	-				+1.0
4,584,998	-				+0.0
4,585,008	+				+0.4
4,585,008	+				-1.0
4,585,008	+				-0.6
4,585,009	-				+0.8
4,585,009	-				-0.2
4,585,305	+		HGI48_RS20515	0.19	-0.5
4,585,306	-		HGI48_RS20515	0.19	-1.3
4,585,306	-		HGI48_RS20515	0.19	-0.4
4,585,366	-		HGI48_RS20515	0.24	-1.0
4,585,397	+				+0.0
4,585,407	+				+1.8
4,585,407	+		HGI48_RS20515	0.26	-0.7
4,585,462	-		HGI48_RS20515	0.30	-0.6
4,585,462	-		HGI48_RS20515	0.30	-1.2
4,585,502	+		HGI48_RS20515	0.33	-0.4
4,585,502	+		HGI48_RS20515	0.33	+0.3
4,585,503	-		HGI48_RS20515	0.33	+0.0
4,585,503	-		HGI48_RS20515	0.33	-0.2
4,585,770	-		HGI48_RS20515	0.52	+1.0
4,585,774	-		HGI48_RS20515	0.52	-0.6
4,585,774	-		HGI48_RS20515	0.52	+0.2