Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20445

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,571,200	-				+0.5
4,571,251	+				+0.2
4,571,252	-				-0.4
4,571,271	+				-0.5
4,571,287	+				-0.8
4,571,287	+				-1.3
4,571,287	+				+0.5
4,571,288	-				-1.1
4,571,288	-				-1.1
4,571,288	-				-0.8
4,571,288	-				-1.0
4,571,288	-				+1.2
4,571,288	-				-2.8
4,571,325	+				+1.0
4,571,326	-				+0.0
4,571,326	-				-0.8
4,571,392	+				-0.2
4,571,392	+				+0.8
4,571,392	+				+0.0
4,571,393	-				-1.2
4,571,394	+				+1.0
4,571,394	+				-0.3
4,571,394	+				-0.6
4,571,395	-				-0.2
4,571,395	-				-0.8
4,571,404	+				-0.6
4,571,404	+				+0.2
4,571,471	-				+1.3
4,571,471	-				-2.3
4,571,471	-				-0.7
4,571,471	-				+1.8
4,571,471	-				-0.1
4,571,471	-				-2.1
4,571,471	-				-0.3
4,571,562	-				-2.6
4,571,578	-				+0.2
4,571,578	-				-1.0
4,571,578	-				-1.0
4,571,771	+		HGI48_RS20445	0.15	-0.9
4,571,771	+		HGI48_RS20445	0.15	+0.3
4,571,906	+		HGI48_RS20445	0.27	-0.4
4,572,105	+		HGI48_RS20445	0.46	+0.6
4,572,105	+		HGI48_RS20445	0.46	+1.0
4,572,105	+		HGI48_RS20445	0.46	-0.7
4,572,105	+		HGI48_RS20445	0.46	+0.4
4,572,105	+		HGI48_RS20445	0.46	+1.0
4,572,105	+		HGI48_RS20445	0.46	+1.3
4,572,105	+		HGI48_RS20445	0.46	-0.4
4,572,105	+		HGI48_RS20445	0.46	+0.0
4,572,106	-		HGI48_RS20445	0.46	+0.8
4,572,106	-		HGI48_RS20445	0.46	-0.7
4,572,116	-		HGI48_RS20445	0.47	+0.6
4,572,147	-		HGI48_RS20445	0.50	+0.4
4,572,147	-		HGI48_RS20445	0.50	-0.1
4,572,147	-		HGI48_RS20445	0.50	-0.4
4,572,147	-		HGI48_RS20445	0.50	-0.8
4,572,182	-		HGI48_RS20445	0.53	-1.3
4,572,231	-				+2.6
4,572,231	-				-0.6
4,572,231	-		HGI48_RS20445	0.58	-0.6
4,572,231	-		HGI48_RS20445	0.58	-1.7
4,572,231	-		HGI48_RS20445	0.58	-1.3
4,572,232	+		HGI48_RS20445	0.58	-1.8
4,572,232	+		HGI48_RS20445	0.58	-0.3
4,572,232	+		HGI48_RS20445	0.58	-1.3
4,572,232	+		HGI48_RS20445	0.58	+0.7
4,572,232	+		HGI48_RS20445	0.58	-1.3
4,572,233	-		HGI48_RS20445	0.58	+0.4
4,572,233	-		HGI48_RS20445	0.58	-1.4
4,572,233	-		HGI48_RS20445	0.58	-0.3
4,572,233	-		HGI48_RS20445	0.58	+0.5
4,572,233	-		HGI48_RS20445	0.58	-1.7
4,572,233	-		HGI48_RS20445	0.58	+1.8
4,572,233	-		HGI48_RS20445	0.58	-1.6
4,572,275	+		HGI48_RS20445	0.62	+0.8
4,572,276	-		HGI48_RS20445	0.62	+0.7
4,572,276	-		HGI48_RS20445	0.62	-0.3
4,572,276	-		HGI48_RS20445	0.62	+0.0
4,572,276	-		HGI48_RS20445	0.62	-0.2
4,572,299	+		HGI48_RS20445	0.64	-0.3
4,572,540	+		HGI48_RS20445	0.86	+0.7
4,572,540	+		HGI48_RS20445	0.86	-0.2
4,572,540	+		HGI48_RS20445	0.86	+0.0
4,572,540	+		HGI48_RS20445	0.86	-1.1
4,572,540	+		HGI48_RS20445	0.86	-1.0
4,572,540	+				+2.4
4,572,540	+		HGI48_RS20445	0.86	-2.7
4,572,540	+		HGI48_RS20445	0.86	-1.1
4,572,541	-		HGI48_RS20445	0.86	+1.0
4,572,541	-		HGI48_RS20445	0.86	+0.3
4,572,541	-		HGI48_RS20445	0.86	+0.3
4,572,541	-		HGI48_RS20445	0.86	+0.3
4,572,541	-		HGI48_RS20445	0.86	+0.4
4,572,543	+		HGI48_RS20445	0.87	-0.8
4,572,543	+		HGI48_RS20445	0.87	+1.0
4,572,543	+		HGI48_RS20445	0.87	+0.1
4,572,543	+		HGI48_RS20445	0.87	-2.0
4,572,543	+		HGI48_RS20445	0.87	-0.4
4,572,543	+		HGI48_RS20445	0.87	+0.6
4,572,544	-		HGI48_RS20445	0.87	-0.3
4,572,544	-		HGI48_RS20445	0.87	-0.3
4,572,646	+				+2.3
4,572,655	+				-0.3
4,572,655	+				+0.5
4,572,684	-				+0.3
4,573,151	+		HGI48_RS20450	0.45	-0.6
4,573,151	+		HGI48_RS20450	0.45	+0.2
4,573,151	+		HGI48_RS20450	0.45	-1.0
4,573,151	+		HGI48_RS20450	0.45	-1.6
4,573,152	-				-0.6
4,573,152	-		HGI48_RS20450	0.45	-0.8
4,573,152	-		HGI48_RS20450	0.45	-0.6
4,573,152	-		HGI48_RS20450	0.45	-1.3
4,573,152	-				+0.0
4,573,152	-		HGI48_RS20450	0.45	+0.0
4,573,221	+		HGI48_RS20450	0.52	-0.5
4,573,564	+		HGI48_RS20450	0.89	+0.6
4,573,564	+		HGI48_RS20450	0.89	+0.0
4,573,564	+		HGI48_RS20450	0.89	-0.5
4,573,578	-				-0.7