Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20090

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,489,621	+		HGI48_RS20085	0.14	-1.0
4,489,622	-		HGI48_RS20085	0.14	+0.9
4,489,628	-		HGI48_RS20085	0.15	+0.0
4,489,628	-		HGI48_RS20085	0.15	+0.1
4,489,883	+		HGI48_RS20085	0.38	+0.2
4,490,291	-		HGI48_RS20085	0.74	+0.2
4,490,291	-		HGI48_RS20085	0.74	-1.3
4,490,600	-				-1.8
4,490,691	+				+1.0
4,490,691	+				-1.6
4,490,692	-				-1.0
4,490,692	-				+0.0
4,490,886	+		HGI48_RS20090	0.25	-0.3
4,490,887	-		HGI48_RS20090	0.25	-0.7
4,491,006	+		HGI48_RS20090	0.35	+0.0
4,491,007	-		HGI48_RS20090	0.35	+0.3
4,491,115	+		HGI48_RS20090	0.44	-1.3
4,491,195	+		HGI48_RS20090	0.51	-0.7
4,491,255	+		HGI48_RS20090	0.56	+0.7
4,491,256	-		HGI48_RS20090	0.56	+0.2
4,491,448	+		HGI48_RS20090	0.72	+0.1
4,491,448	+		HGI48_RS20090	0.72	-2.0
4,491,484	+				+0.0
4,491,484	+		HGI48_RS20090	0.75	-1.8
4,491,484	+		HGI48_RS20090	0.75	-0.6
4,491,485	-		HGI48_RS20090	0.75	+0.0
4,491,485	-		HGI48_RS20090	0.75	-1.1
4,491,584	+		HGI48_RS20090	0.83	-0.2
4,491,585	-		HGI48_RS20090	0.83	-1.0
4,491,585	-		HGI48_RS20090	0.83	+0.1
4,491,585	-		HGI48_RS20090	0.83	-0.2
4,491,585	-		HGI48_RS20090	0.83	+1.2
4,491,672	+				+0.3
4,491,673	-				-1.1
4,491,754	+				+1.8
4,491,755	-				-0.4
4,491,755	-				+0.2
4,491,855	-				-0.2
4,491,893	+				+0.1
4,491,893	+				+0.3
4,491,893	+				-0.7
4,491,894	-				-0.5
4,491,894	-				+1.0
4,491,894	-				-2.2
4,491,894	-				-0.7
4,491,899	-				-2.9
4,491,925	-				+0.7
4,491,944	+				+1.0
4,491,944	+				-0.3
4,491,944	+				-0.2
4,491,944	+				-0.5
4,491,945	-				+0.3
4,491,998	+				+0.5
4,491,999	-				+3.0
4,491,999	-				+0.2
4,492,044	+				+1.8
4,492,044	+				+1.0
4,492,044	+				-0.6
4,492,044	+				+0.8
4,492,044	+				-1.8
4,492,044	+				+0.0
4,492,044	+				-0.0
4,492,044	+				+0.1
4,492,044	+				+0.6
4,492,044	+				-1.0
4,492,045	-				-0.7
4,492,045	-				+0.3
4,492,045	-				-0.6
4,492,045	-				+0.8
4,492,045	-				+0.4
4,492,045	-				-0.3
4,492,045	-				-1.0
4,492,045	-				+0.0
4,492,045	-				-1.8
4,492,045	-				-0.1
4,492,045	-				-0.5
4,492,045	-				-0.3
4,492,045	-				-0.6
4,492,064	+				+0.5
4,492,065	-				-0.6
4,492,149	+				-0.2
4,492,163	+				-0.7
4,492,337	+				+0.0
4,492,337	+				-1.8
4,492,338	-				+1.0
4,492,338	-				-1.6
4,492,342	+				+0.0
4,492,368	+				-0.2
4,492,368	+				-0.6
4,492,368	+				-0.1
4,492,368	+				-0.9
4,492,368	+				-0.4
4,492,368	+				+0.5
4,492,368	+				+0.5
4,492,368	+				-0.6
4,492,368	+				-0.2
4,492,369	-				-1.3
4,492,369	-				-0.6
4,492,369	-				-2.6
4,492,369	-				-1.7
4,492,369	-				+0.5
4,492,369	-				+0.0
4,492,369	-				-1.6
4,492,369	-				-1.3
4,492,461	+				+0.3
4,492,461	+				+0.4
4,492,462	-				+0.0
4,492,546	+		HGI48_RS20095	0.12	-1.3
4,492,546	+				+0.4
4,492,546	+		HGI48_RS20095	0.12	-0.7
4,492,546	+		HGI48_RS20095	0.12	-1.1
4,492,547	-		HGI48_RS20095	0.12	-0.3
4,492,547	-		HGI48_RS20095	0.12	+0.8
4,492,547	-		HGI48_RS20095	0.12	-0.6
4,492,706	-		HGI48_RS20095	0.26	+0.4