Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19670
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,390,612 | + | -1.2 | |||
4,390,612 | + | -0.4 | |||
4,390,654 | + | -1.4 | |||
4,390,655 | - | +0.2 | |||
4,391,538 | - | +0.8 | |||
4,391,538 | - | -1.0 | |||
4,391,565 | + | -1.8 | |||
4,391,566 | - | -0.0 | |||
4,391,566 | - | +0.4 | |||
4,391,573 | + | +1.6 | |||
4,391,603 | - | -1.2 | |||
4,391,603 | - | -0.7 | |||
4,391,603 | - | -0.0 | |||
4,391,603 | - | -1.0 | |||
4,391,603 | - | -1.0 | |||
4,391,685 | - | -1.6 | |||
4,391,685 | - | -0.6 | |||
4,391,735 | - | HGI48_RS19670 | 0.13 | -1.8 | |
4,391,735 | - | HGI48_RS19670 | 0.13 | -0.7 | |
4,391,735 | - | HGI48_RS19670 | 0.13 | +0.3 | |
4,391,735 | - | HGI48_RS19670 | 0.13 | -0.1 | |
4,391,765 | - | HGI48_RS19670 | 0.16 | -0.1 | |
4,391,765 | - | -0.6 | |||
4,391,765 | - | -0.6 | |||
4,391,765 | - | HGI48_RS19670 | 0.16 | -1.0 | |
4,391,801 | - | -0.6 | |||
4,391,801 | - | HGI48_RS19670 | 0.19 | +2.3 | |
4,391,801 | - | +1.0 | |||
4,391,832 | - | HGI48_RS19670 | 0.22 | -0.6 | |
4,391,847 | - | HGI48_RS19670 | 0.23 | +1.3 | |
4,391,961 | - | +2.0 | |||
4,391,976 | - | HGI48_RS19670 | 0.36 | -1.6 | |
4,392,393 | - | HGI48_RS19670 | 0.75 | -0.0 | |
4,392,393 | - | HGI48_RS19670 | 0.75 | +0.3 | |
4,392,453 | - | HGI48_RS19670 | 0.81 | -0.0 | |
4,392,677 | - | -0.6 |
Or see this region's nucleotide sequence