Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19605

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,375,107	+				-0.4
4,375,124	-				-0.2
4,375,158	-				+0.1
4,375,177	+				-1.6
4,375,178	-				+0.5
4,375,178	-				-1.3
4,375,285	+				+0.2
4,375,285	+				-1.3
4,375,286	-				+1.6
4,375,286	-				-0.0
4,375,286	-				+1.0
4,375,286	-				-0.2
4,375,293	-				+0.2
4,375,293	-				-0.3
4,375,322	+		HGI48_RS19600	0.11	-1.8
4,375,323	-		HGI48_RS19600	0.11	+0.4
4,375,335	-		HGI48_RS19600	0.13	-0.4
4,375,367	+		HGI48_RS19600	0.18	+0.6
4,375,367	+		HGI48_RS19600	0.18	-1.6
4,375,368	-		HGI48_RS19600	0.18	-0.2
4,375,368	-		HGI48_RS19600	0.18	+0.2
4,375,486	+		HGI48_RS19600	0.37	+0.4
4,375,579	+		HGI48_RS19600	0.52	-0.5
4,375,586	+		HGI48_RS19600	0.53	-0.6
4,375,587	-		HGI48_RS19600	0.53	-0.0
4,375,608	-		HGI48_RS19600	0.56	+0.7
4,375,645	+		HGI48_RS19600	0.62	+1.0
4,375,646	-				+1.6
4,375,682	-		HGI48_RS19600	0.68	+0.6
4,375,682	-		HGI48_RS19600	0.68	-2.6
4,375,682	-				+1.0
4,375,716	-		HGI48_RS19600	0.74	+0.4
4,375,716	-		HGI48_RS19600	0.74	-1.2
4,375,716	-		HGI48_RS19600	0.74	+0.1
4,375,897	+				-2.2
4,375,897	+				-0.8
4,375,898	-				-2.0
4,376,195	-				-1.2
4,376,259	+		HGI48_RS19605	0.15	-0.4
4,376,259	+		HGI48_RS19605	0.15	+0.0
4,376,259	+		HGI48_RS19605	0.15	-0.7
4,376,260	-		HGI48_RS19605	0.15	-0.0
4,376,260	-		HGI48_RS19605	0.15	+0.1
4,376,260	-		HGI48_RS19605	0.15	+0.3
4,376,260	-		HGI48_RS19605	0.15	-0.9
4,376,260	-		HGI48_RS19605	0.15	+0.6
4,376,328	+		HGI48_RS19605	0.21	-1.2
4,376,329	-		HGI48_RS19605	0.21	+0.1
4,376,329	-		HGI48_RS19605	0.21	-1.8
4,376,358	+				+1.4
4,376,358	+		HGI48_RS19605	0.23	-0.2
4,376,359	-		HGI48_RS19605	0.23	-1.3
4,376,359	-		HGI48_RS19605	0.23	+0.5
4,376,359	-		HGI48_RS19605	0.23	-0.0
4,376,359	-		HGI48_RS19605	0.23	-1.3
4,376,391	+		HGI48_RS19605	0.26	-0.6
4,376,391	+		HGI48_RS19605	0.26	-0.5
4,376,392	-		HGI48_RS19605	0.26	+0.6
4,376,411	+		HGI48_RS19605	0.28	+0.2
4,376,574	+		HGI48_RS19605	0.42	-0.4
4,376,574	+		HGI48_RS19605	0.42	+0.2
4,376,574	+		HGI48_RS19605	0.42	-1.0
4,376,574	+		HGI48_RS19605	0.42	-1.0
4,376,958	+		HGI48_RS19605	0.76	-2.7
4,377,002	+				+1.0
4,377,002	+		HGI48_RS19605	0.80	-1.0
4,377,003	-		HGI48_RS19605	0.80	+0.2
4,377,085	+		HGI48_RS19605	0.87	+0.1
4,377,086	-		HGI48_RS19605	0.87	+1.8
4,377,154	+				-1.1
4,377,162	+				+0.2
4,377,162	+				+0.5
4,377,162	+				+1.3
4,377,162	+				-0.2
4,377,162	+				+1.0
4,377,162	+				-1.3
4,377,162	+				+0.8
4,377,163	-				+0.6
4,377,163	-				+2.0
4,377,163	-				-0.8
4,377,163	-				-0.5
4,377,163	-				+1.0
4,377,235	+				-0.2
4,377,235	+				-0.1
4,377,252	+				-2.2
4,377,252	+				-2.6
4,377,252	+				+2.3
4,377,252	+				+0.4
4,377,252	+				-0.2
4,377,252	+				+0.7
4,377,253	-				-0.6
4,377,253	-				-2.7
4,377,253	-				+1.0
4,377,253	-				-0.3
4,377,689	+		HGI48_RS19610	0.35	+0.5
4,377,690	-				+0.4
4,377,690	-		HGI48_RS19610	0.36	-0.9
4,377,690	-		HGI48_RS19610	0.36	-0.3
4,377,749	+				+1.4
4,377,749	+		HGI48_RS19610	0.40	-1.0
4,377,749	+		HGI48_RS19610	0.40	-0.2
4,377,749	+		HGI48_RS19610	0.40	+1.0
4,377,749	+		HGI48_RS19610	0.40	-1.3
4,377,750	-		HGI48_RS19610	0.40	+0.4
4,377,750	-		HGI48_RS19610	0.40	+0.5
4,377,797	+		HGI48_RS19610	0.44	-0.0
4,377,797	+		HGI48_RS19610	0.44	-0.0
4,377,798	-		HGI48_RS19610	0.44	+0.3
4,377,798	-				-0.0
4,377,824	-		HGI48_RS19610	0.46	+0.6
4,377,917	-		HGI48_RS19610	0.53	+0.8
4,377,917	-		HGI48_RS19610	0.53	+0.6
4,377,944	+		HGI48_RS19610	0.55	+1.0
4,377,945	-				-0.6
4,377,945	-		HGI48_RS19610	0.55	+0.6
4,377,977	-		HGI48_RS19610	0.58	-1.2
4,377,977	-		HGI48_RS19610	0.58	-1.0
4,378,004	+		HGI48_RS19610	0.60	-0.9
4,378,118	+		HGI48_RS19610	0.69	+1.3
4,378,118	+		HGI48_RS19610	0.69	+0.6
4,378,118	+		HGI48_RS19610	0.69	+0.1
4,378,118	+		HGI48_RS19610	0.69	+0.1
4,378,118	+		HGI48_RS19610	0.69	+0.9
4,378,118	+				+1.0
4,378,119	-		HGI48_RS19610	0.69	-0.9
4,378,119	-		HGI48_RS19610	0.69	+0.2
4,378,119	-		HGI48_RS19610	0.69	-0.0
4,378,119	-		HGI48_RS19610	0.69	-0.0
4,378,227	+		HGI48_RS19610	0.77	+0.2
4,378,228	-		HGI48_RS19610	0.77	-0.6
4,378,229	+		HGI48_RS19610	0.77	-0.2
4,378,229	+		HGI48_RS19610	0.77	-0.5
4,378,229	+		HGI48_RS19610	0.77	-1.0
4,378,229	+		HGI48_RS19610	0.77	-1.6
4,378,229	+				-0.6
4,378,229	+		HGI48_RS19610	0.77	-0.8
4,378,229	+		HGI48_RS19610	0.77	-1.1
4,378,229	+		HGI48_RS19610	0.77	+0.3
4,378,229	+				+1.0
4,378,229	+		HGI48_RS19610	0.77	-1.0
4,378,229	+		HGI48_RS19610	0.77	-1.6
4,378,229	+		HGI48_RS19610	0.77	-1.2
4,378,229	+		HGI48_RS19610	0.77	-1.2
4,378,229	+		HGI48_RS19610	0.77	-0.0
4,378,229	+		HGI48_RS19610	0.77	-2.2
4,378,229	+		HGI48_RS19610	0.77	-0.9
4,378,229	+		HGI48_RS19610	0.77	-0.0
4,378,229	+		HGI48_RS19610	0.77	-0.2
4,378,230	-		HGI48_RS19610	0.77	-1.3
4,378,230	-				+0.4
4,378,230	-		HGI48_RS19610	0.77	-0.0
4,378,230	-		HGI48_RS19610	0.77	-0.4
4,378,230	-		HGI48_RS19610	0.77	-0.4
4,378,230	-		HGI48_RS19610	0.77	-0.0
4,378,230	-		HGI48_RS19610	0.77	+0.3
4,378,230	-				+0.4
4,378,230	-		HGI48_RS19610	0.77	+0.6
4,378,230	-				+1.7
4,378,235	+		HGI48_RS19610	0.78	-1.8