Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19050

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,273,034	+				+0.7
4,273,036	+				+2.0
4,273,036	+				-1.0
4,274,061	+				+0.4
4,274,061	+				+1.7
4,274,062	-				+1.2
4,274,234	+				-0.5
4,274,368	+		HGI48_RS19050	0.10	+0.4
4,274,369	-		HGI48_RS19050	0.10	-1.6
4,274,369	-		HGI48_RS19050	0.10	-1.2
4,274,400	+		HGI48_RS19050	0.11	+0.2
4,274,401	-		HGI48_RS19050	0.11	-0.3
4,274,560	-		HGI48_RS19050	0.16	-1.1
4,274,582	-		HGI48_RS19050	0.17	-0.3
4,274,582	-		HGI48_RS19050	0.17	+1.5
4,274,663	+		HGI48_RS19050	0.19	-0.0
4,274,719	-		HGI48_RS19050	0.21	+0.2
4,274,919	+		HGI48_RS19050	0.27	+0.3
4,274,919	+		HGI48_RS19050	0.27	-0.8
4,274,919	+		HGI48_RS19050	0.27	-0.5
4,274,920	-		HGI48_RS19050	0.27	-1.1
4,274,920	-		HGI48_RS19050	0.27	-0.5
4,274,920	-		HGI48_RS19050	0.27	-2.0
4,275,080	+		HGI48_RS19050	0.32	-1.6
4,275,317	+		HGI48_RS19050	0.39	-0.0
4,275,522	-		HGI48_RS19050	0.45	-1.3
4,275,575	+		HGI48_RS19050	0.47	-0.2
4,275,576	-		HGI48_RS19050	0.47	+1.6
4,275,741	+		HGI48_RS19050	0.52	+1.1
4,275,741	+		HGI48_RS19050	0.52	+0.8
4,275,831	-		HGI48_RS19050	0.54	-1.1
4,275,834	-		HGI48_RS19050	0.54	-0.9
4,275,834	-		HGI48_RS19050	0.54	+0.2
4,275,854	-		HGI48_RS19050	0.55	-1.3
4,275,854	-		HGI48_RS19050	0.55	-3.1
4,275,950	-		HGI48_RS19050	0.58	+0.3
4,275,950	-		HGI48_RS19050	0.58	-0.4
4,275,950	-		HGI48_RS19050	0.58	-2.2
4,276,001	+		HGI48_RS19050	0.59	-0.8
4,276,002	-		HGI48_RS19050	0.60	-0.9
4,276,104	-		HGI48_RS19050	0.63	-0.5
4,276,179	-				-0.6
4,276,179	-				-0.6
4,276,179	-		HGI48_RS19050	0.65	-0.1
4,276,179	-		HGI48_RS19050	0.65	-0.0
4,276,621	+		HGI48_RS19050	0.78	-0.2
4,276,622	-		HGI48_RS19050	0.78	-0.6
4,276,670	+		HGI48_RS19050	0.80	-0.3
4,276,671	-		HGI48_RS19050	0.80	-0.2
4,276,779	+		HGI48_RS19050	0.83	+0.6
4,276,891	+		HGI48_RS19050	0.86	-0.0
4,276,891	+		HGI48_RS19050	0.86	-0.8
4,276,892	-		HGI48_RS19050	0.86	-1.1
4,276,892	-		HGI48_RS19050	0.86	+1.5
4,276,895	-		HGI48_RS19050	0.86	+0.1
4,277,165	-				+2.0
4,277,191	+				-0.6
4,277,191	+				-0.4
4,277,191	+				+1.3
4,277,192	-				+0.6
4,277,192	-				-0.6
4,277,235	-				-1.0
4,277,278	-				+0.4
4,277,292	+				+1.0
4,277,293	-				-0.6
4,277,345	+				+0.7
4,277,346	-				-1.0
4,277,381	-				+0.7
4,277,381	-				-0.4
4,277,413	+				+0.2
4,277,413	+				+0.3
4,277,413	+				+1.5
4,277,413	+				-1.0
4,277,413	+				+0.6
4,277,413	+				-0.4
4,277,413	+				+0.8
4,277,693	+		HGI48_RS19055	0.26	-1.2
4,277,696	+				+1.0
4,278,039	-		HGI48_RS19055	0.62	-0.6
4,278,048	-		HGI48_RS19055	0.63	-1.3
4,278,135	-		HGI48_RS19055	0.72	-0.6