Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,228,945	+		HGI48_RS18860	0.42	+0.2
4,228,945	+				+1.0
4,228,946	-		HGI48_RS18860	0.42	-0.4
4,229,027	+		HGI48_RS18860	0.51	-0.2
4,229,027	+		HGI48_RS18860	0.51	-0.0
4,229,027	+		HGI48_RS18860	0.51	-1.0
4,229,028	-				+1.0
4,229,155	+		HGI48_RS18860	0.66	+0.2
4,229,164	-		HGI48_RS18860	0.67	-1.5
4,229,179	-		HGI48_RS18860	0.69	-0.6
4,229,379	+				+0.1
4,229,380	-				-1.6
4,229,380	-				-1.5
4,229,380	-				-2.4
4,229,380	-				-0.7
4,229,428	+				-0.2
4,229,428	+				-0.8
4,229,428	+				+0.1
4,229,428	+				+1.0
4,229,428	+				-0.6
4,229,429	-				-1.4
4,229,620	-				-0.1
4,229,694	-				+0.8
4,229,713	+				-0.3
4,229,717	-				-0.5
4,229,735	+				-0.6
4,229,736	-				+0.8
4,229,769	-				-1.0
4,229,776	-				-2.2
4,229,836	+				-0.5
4,229,902	+				-0.7
4,229,911	+				+0.2
4,229,940	+				-0.6
4,229,960	-				+1.6
4,229,962	+				-1.4
4,230,090	+				+1.0
4,230,090	+		HGI48_RS18865	0.23	+0.2
4,230,174	+		HGI48_RS18865	0.34	+0.2
4,230,233	+		HGI48_RS18865	0.41	-1.4
4,230,324	+		HGI48_RS18865	0.52	-1.3
4,230,339	+		HGI48_RS18865	0.54	-0.1
4,230,366	-		HGI48_RS18865	0.58	+1.0
4,230,367	+		HGI48_RS18865	0.58	+0.3
4,230,368	-		HGI48_RS18865	0.58	-1.0
4,230,541	-		HGI48_RS18865	0.79	+0.2
4,230,614	-		HGI48_RS18865	0.88	-0.5
4,230,614	-		HGI48_RS18865	0.88	+0.6
4,230,618	+		HGI48_RS18865	0.89	+1.1
4,230,670	+				-1.7
4,230,870	-		HGI48_RS18870	0.41	-0.2
4,230,904	-		HGI48_RS18870	0.49	+0.6
4,230,958	+				+1.0
4,230,960	+		HGI48_RS18870	0.63	+0.2
4,230,983	+		HGI48_RS18870	0.69	+0.4
4,231,013	-		HGI48_RS18870	0.76	+0.4
4,231,016	+		HGI48_RS18870	0.77	-1.0
4,231,017	-		HGI48_RS18870	0.77	+0.6
4,231,214	-				-0.6
4,231,214	-				+0.6
4,231,214	-				-0.6
4,231,216	+				-1.0
4,231,217	-				-0.7
4,231,253	+		HGI48_RS18875	0.13	-0.4
4,231,254	-		HGI48_RS18875	0.13	-1.1
4,231,255	+		HGI48_RS18875	0.14	-1.0
4,231,261	+		HGI48_RS18875	0.15	-1.0
4,231,262	-		HGI48_RS18875	0.15	-0.7
4,231,262	-		HGI48_RS18875	0.15	-1.6
4,231,276	+		HGI48_RS18875	0.18	-0.0
4,231,289	+		HGI48_RS18875	0.21	-2.0
4,231,404	+		HGI48_RS18875	0.45	-0.4
4,231,472	-		HGI48_RS18875	0.59	+0.1
4,231,508	+		HGI48_RS18875	0.66	-0.4
4,231,509	-		HGI48_RS18875	0.66	+0.5
4,231,548	-		HGI48_RS18875	0.75	-0.0
4,231,554	-		HGI48_RS18875	0.76	+1.0
4,231,623	-				+1.0
4,231,667	+				+0.6
4,231,668	-				-0.0
4,231,668	-				-0.0
4,231,687	+				-0.5
4,231,688	-				-1.2
4,231,688	-				-0.0