Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18135

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,067,685	+				+0.3
4,067,685	+				-1.4
4,067,685	+				+0.2
4,067,686	-				+1.9
4,067,686	-				-0.7
4,067,720	+				-1.1
4,067,720	+				+0.6
4,067,720	+				-0.8
4,067,720	+				+0.5
4,067,721	-				-1.3
4,067,864	-		HGI48_RS18130	0.28	+0.2
4,067,874	-		HGI48_RS18130	0.29	-1.3
4,067,887	+				+0.9
4,067,887	+		HGI48_RS18130	0.31	+0.6
4,067,955	+		HGI48_RS18130	0.40	-0.5
4,067,955	+		HGI48_RS18130	0.40	-0.6
4,068,091	+				+2.2
4,068,124	-		HGI48_RS18130	0.62	+1.2
4,068,129	+		HGI48_RS18130	0.62	-1.7
4,068,129	+		HGI48_RS18130	0.62	-0.4
4,068,130	-		HGI48_RS18130	0.62	-1.1
4,068,130	-		HGI48_RS18130	0.62	-1.4
4,068,130	-		HGI48_RS18130	0.62	+0.5
4,068,130	-		HGI48_RS18130	0.62	-0.4
4,068,160	+		HGI48_RS18130	0.66	-1.1
4,068,160	+		HGI48_RS18130	0.66	-0.1
4,068,160	+				+1.9
4,068,160	+		HGI48_RS18130	0.66	-0.8
4,068,160	+				+0.3
4,068,161	-		HGI48_RS18130	0.66	-0.1
4,068,161	-		HGI48_RS18130	0.66	+0.3
4,068,161	-		HGI48_RS18130	0.66	+1.3
4,068,161	-		HGI48_RS18130	0.66	+0.2
4,068,195	+		HGI48_RS18130	0.71	-0.5
4,068,196	-		HGI48_RS18130	0.71	+1.2
4,068,196	-		HGI48_RS18130	0.71	-1.4
4,068,260	-		HGI48_RS18130	0.79	+0.9
4,068,418	+				-0.3
4,068,419	-				-1.1
4,068,426	+				+1.2
4,068,427	-				+0.6
4,068,454	+				-1.0
4,068,466	-				-0.3
4,068,493	+				-0.3
4,068,494	-				+1.8
4,068,496	+				-0.0
4,068,497	-				-0.2
4,068,500	-				-0.9
4,068,526	+				+0.6
4,068,526	+				-1.3
4,068,526	+				-0.1
4,068,526	+				-1.0
4,068,526	+				+0.4
4,068,526	+				+0.2
4,068,527	-				+1.5
4,068,527	-				-1.1
4,068,528	+				+0.7
4,068,580	+				+0.4
4,068,581	-				-0.1
4,068,581	-				-0.7
4,068,581	-				-1.4
4,068,637	+				+0.3
4,068,637	+				+0.3
4,068,638	-				+0.3
4,068,718	+				-0.5
4,068,719	-				-1.1
4,068,719	-				-0.8
4,068,737	-				-2.7
4,068,794	+		HGI48_RS18135	0.14	+0.0
4,068,794	+		HGI48_RS18135	0.14	-0.4
4,068,794	+		HGI48_RS18135	0.14	-0.7
4,068,794	+		HGI48_RS18135	0.14	+0.2
4,068,795	-		HGI48_RS18135	0.14	-0.3
4,068,844	+		HGI48_RS18135	0.20	-0.5
4,068,844	+		HGI48_RS18135	0.20	+1.1
4,068,844	+		HGI48_RS18135	0.20	-0.1
4,068,844	+		HGI48_RS18135	0.20	+0.0
4,068,844	+		HGI48_RS18135	0.20	-0.2
4,068,844	+		HGI48_RS18135	0.20	+0.6
4,068,847	+		HGI48_RS18135	0.20	-1.9
4,068,857	+		HGI48_RS18135	0.21	-0.3
4,068,869	+		HGI48_RS18135	0.23	+0.6
4,068,895	+				-0.7
4,069,009	+		HGI48_RS18135	0.39	-1.4
4,069,009	+		HGI48_RS18135	0.39	+0.5
4,069,009	+		HGI48_RS18135	0.39	+1.6
4,069,009	+		HGI48_RS18135	0.39	+1.7
4,069,009	+		HGI48_RS18135	0.39	-1.1
4,069,010	-		HGI48_RS18135	0.39	-0.7
4,069,010	-		HGI48_RS18135	0.39	-1.6
4,069,061	-		HGI48_RS18135	0.45	-0.7
4,069,064	+		HGI48_RS18135	0.46	-0.7
4,069,065	-		HGI48_RS18135	0.46	+0.2
4,069,096	+				+2.5
4,069,097	-		HGI48_RS18135	0.50	-1.1
4,069,097	-		HGI48_RS18135	0.50	-0.4
4,069,137	-		HGI48_RS18135	0.54	-0.9
4,069,141	-		HGI48_RS18135	0.55	-0.5
4,069,178	+		HGI48_RS18135	0.59	-0.9
4,069,178	+		HGI48_RS18135	0.59	-0.7
4,069,179	-				+0.9
4,069,185	+		HGI48_RS18135	0.60	+0.6
4,069,296	+		HGI48_RS18135	0.73	-0.8
4,069,296	+		HGI48_RS18135	0.73	-2.6
4,069,297	-		HGI48_RS18135	0.73	+0.7
4,069,299	-		HGI48_RS18135	0.73	-0.6
4,069,299	-		HGI48_RS18135	0.73	+0.3
4,069,349	+		HGI48_RS18135	0.79	-1.7
4,069,349	+		HGI48_RS18135	0.79	-1.4
4,069,350	-				+0.3
4,069,376	+		HGI48_RS18135	0.82	-0.1
4,069,402	+		HGI48_RS18135	0.85	+0.9
4,069,421	+		HGI48_RS18135	0.88	-0.1
4,069,449	+				-0.9
4,069,450	-				-0.8
4,069,450	-				+1.3
4,069,452	-				-1.9
4,069,452	-				-0.3
4,069,452	-				-0.1
4,069,452	-				+0.0
4,069,479	+				-1.3
4,069,518	-				+0.9
4,069,530	+				-0.5
4,069,533	-				+0.9
4,069,643	-		HGI48_RS18140	0.19	-0.4
4,070,056	+				+0.3
4,070,077	+				-1.1
4,070,151	-				-0.1
4,070,427	+		HGI48_RS18145	0.58	-1.6
4,070,451	+				+0.3
4,070,472	-		HGI48_RS18145	0.66	-0.5
4,070,488	+		HGI48_RS18145	0.68	-0.1