Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17780

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,986,314	-				-0.5
3,986,326	+				+0.5
3,986,360	+				+0.9
3,986,385	-				-1.6
3,986,457	-		HGI48_RS17775	0.13	-1.1
3,986,471	-		HGI48_RS17775	0.15	-0.7
3,986,512	+		HGI48_RS17775	0.19	-1.9
3,986,512	+		HGI48_RS17775	0.19	-1.7
3,986,513	-		HGI48_RS17775	0.19	-1.9
3,986,513	-		HGI48_RS17775	0.19	-0.9
3,986,513	-		HGI48_RS17775	0.19	-3.5
3,986,513	-		HGI48_RS17775	0.19	-0.1
3,986,533	+		HGI48_RS17775	0.21	-0.7
3,986,533	+		HGI48_RS17775	0.21	-0.3
3,986,557	+				-0.1
3,986,558	-		HGI48_RS17775	0.23	-1.4
3,986,811	-		HGI48_RS17775	0.49	+0.9
3,986,811	-		HGI48_RS17775	0.49	-2.6
3,986,814	-				-0.1
3,986,814	-		HGI48_RS17775	0.50	-1.7
3,986,842	+				-0.1
3,986,842	+				+0.9
3,986,843	-		HGI48_RS17775	0.52	-1.1
3,986,843	-		HGI48_RS17775	0.52	-1.9
3,986,843	-		HGI48_RS17775	0.52	-1.7
3,986,843	-		HGI48_RS17775	0.52	-0.4
3,987,284	+				-1.7
3,987,284	+				+0.9
3,987,284	+				-2.6
3,987,284	+				-0.1
3,987,284	+				-1.5
3,987,285	-				-1.7
3,987,285	-				+0.9
3,987,285	-				-0.1
3,987,285	-				-1.1
3,987,511	+		HGI48_RS17780	0.16	+1.5
3,987,512	-		HGI48_RS17780	0.16	+0.9
3,987,515	+		HGI48_RS17780	0.17	+0.5
3,987,515	+		HGI48_RS17780	0.17	+0.1
3,987,515	+		HGI48_RS17780	0.17	-0.7
3,987,516	-		HGI48_RS17780	0.17	+0.5
3,987,663	+		HGI48_RS17780	0.28	+0.1
3,987,663	+		HGI48_RS17780	0.28	-0.3
3,987,729	+				+0.3
3,987,812	-		HGI48_RS17780	0.40	-1.5
3,987,902	-		HGI48_RS17780	0.47	-0.9
3,987,958	+		HGI48_RS17780	0.51	+0.9
3,987,958	-				+2.2
3,987,960	+		HGI48_RS17780	0.51	-2.3
3,987,960	+		HGI48_RS17780	0.51	-1.9
3,987,960	+		HGI48_RS17780	0.51	+0.2
3,987,960	+		HGI48_RS17780	0.51	+1.1
3,987,960	+		HGI48_RS17780	0.51	-0.7
3,987,960	+		HGI48_RS17780	0.51	-0.4
3,987,960	+				+0.9
3,987,961	-		HGI48_RS17780	0.51	-1.9
3,987,961	-		HGI48_RS17780	0.51	+0.1
3,987,961	-				+1.3
3,987,961	-		HGI48_RS17780	0.51	-1.1
3,987,994	+		HGI48_RS17780	0.54	+1.1
3,988,006	+		HGI48_RS17780	0.55	-2.1
3,988,007	-		HGI48_RS17780	0.55	-0.1
3,988,007	-		HGI48_RS17780	0.55	-0.7
3,988,066	+		HGI48_RS17780	0.59	-0.6
3,988,067	-		HGI48_RS17780	0.60	-1.4
3,988,067	-		HGI48_RS17780	0.60	+0.6
3,988,179	+		HGI48_RS17780	0.68	+0.9
3,988,180	-		HGI48_RS17780	0.68	+0.7
3,988,559	-				-1.4
3,988,567	-				-0.9
3,988,647	-				-0.9
3,988,680	+				+1.9
3,988,680	+				-1.3
3,988,680	+				-0.1
3,988,681	-				+0.9
3,988,681	-				+0.4
3,988,687	+				+0.5
3,988,687	+				-0.1
3,988,688	-				-0.2
3,988,688	-				-1.9
3,988,733	-				+0.3
3,988,764	-				-0.1
3,988,795	+				+0.1
3,988,796	-				-0.6
3,988,796	-				+0.9
3,988,796	-				-2.7
3,988,796	-				-1.3
3,988,796	-				+0.6
3,988,796	-				+0.9
3,988,801	+				+1.3
3,988,801	+				-2.6
3,988,802	-				-2.2
3,988,802	-				-0.7
3,988,857	-				-1.7
3,988,903	+				+0.7
3,988,904	-				+0.7
3,988,904	-				+0.0
3,989,019	+		HGI48_RS17785	0.19	-1.4
3,989,297	+		HGI48_RS17785	0.44	-0.7
3,989,297	+		HGI48_RS17785	0.44	-0.1
3,989,298	-		HGI48_RS17785	0.44	-0.7
3,989,298	-		HGI48_RS17785	0.44	+0.9
3,989,426	+		HGI48_RS17785	0.55	-0.3
3,989,426	+		HGI48_RS17785	0.55	-2.1
3,989,426	+		HGI48_RS17785	0.55	+0.5
3,989,426	+		HGI48_RS17785	0.55	-0.4
3,989,426	+		HGI48_RS17785	0.55	+0.2
3,989,426	+		HGI48_RS17785	0.55	-0.3
3,989,426	+		HGI48_RS17785	0.55	-0.6
3,989,426	+				+1.9
3,989,427	-		HGI48_RS17785	0.55	+0.6
3,989,427	-		HGI48_RS17785	0.55	+1.5
3,989,427	-		HGI48_RS17785	0.55	+0.2
3,989,427	-		HGI48_RS17785	0.55	+1.1
3,989,427	-		HGI48_RS17785	0.55	+0.7
3,989,427	-		HGI48_RS17785	0.55	-0.2
3,989,509	+		HGI48_RS17785	0.62	+0.3
3,989,509	+		HGI48_RS17785	0.62	+1.7
3,989,509	+		HGI48_RS17785	0.62	+0.5
3,989,509	+				-0.7
3,989,510	-		HGI48_RS17785	0.62	-0.1
3,989,510	-		HGI48_RS17785	0.62	-1.7
3,989,525	+		HGI48_RS17785	0.64	+0.6
3,989,526	-		HGI48_RS17785	0.64	-1.6
3,989,526	-		HGI48_RS17785	0.64	-0.8
3,989,526	-		HGI48_RS17785	0.64	-0.4
3,989,526	-		HGI48_RS17785	0.64	-1.2
3,989,528	+		HGI48_RS17785	0.64	+0.3
3,989,528	+		HGI48_RS17785	0.64	-0.4
3,989,528	+		HGI48_RS17785	0.64	+0.9
3,989,528	+				+0.9
3,989,529	-				+1.5
3,989,529	-		HGI48_RS17785	0.64	-1.1
3,989,529	-		HGI48_RS17785	0.64	-1.1