Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17535

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,923,330	+		HGI48_RS17525	0.31	-0.5
3,923,330	+		HGI48_RS17525	0.31	+0.6
3,923,330	+		HGI48_RS17525	0.31	+0.1
3,923,330	+		HGI48_RS17525	0.31	-1.9
3,923,331	-		HGI48_RS17525	0.31	-0.7
3,923,331	-				+0.3
3,923,331	-		HGI48_RS17525	0.31	-0.7
3,923,331	-		HGI48_RS17525	0.31	-0.1
3,923,334	+		HGI48_RS17525	0.32	-0.4
3,923,334	+		HGI48_RS17525	0.32	-0.1
3,923,334	+		HGI48_RS17525	0.32	-1.9
3,923,334	+		HGI48_RS17525	0.32	-1.1
3,923,334	+		HGI48_RS17525	0.32	+1.7
3,923,334	+		HGI48_RS17525	0.32	-1.1
3,923,334	+		HGI48_RS17525	0.32	-0.5
3,923,335	-		HGI48_RS17525	0.32	-1.1
3,923,335	-				+0.3
3,923,335	-		HGI48_RS17525	0.32	-1.4
3,923,335	-		HGI48_RS17525	0.32	-0.7
3,923,335	-		HGI48_RS17525	0.32	-0.9
3,923,335	-		HGI48_RS17525	0.32	-0.1
3,923,335	-		HGI48_RS17525	0.32	+0.3
3,923,478	+		HGI48_RS17525	0.52	-0.4
3,923,478	+		HGI48_RS17525	0.52	+0.3
3,923,478	+		HGI48_RS17525	0.52	+0.5
3,923,478	+		HGI48_RS17525	0.52	-0.8
3,923,523	+		HGI48_RS17525	0.59	+0.9
3,923,523	+		HGI48_RS17525	0.59	-1.7
3,923,523	+		HGI48_RS17525	0.59	-1.1
3,923,524	-		HGI48_RS17525	0.59	-0.0
3,923,524	-		HGI48_RS17525	0.59	+0.7
3,923,524	-		HGI48_RS17525	0.59	-0.3
3,923,535	+		HGI48_RS17525	0.60	+1.0
3,923,535	+		HGI48_RS17525	0.60	+0.3
3,923,535	+		HGI48_RS17525	0.60	-1.4
3,923,535	+				-0.7
3,923,614	-		HGI48_RS17525	0.72	+0.3
3,923,614	-		HGI48_RS17525	0.72	+0.6
3,923,645	+		HGI48_RS17525	0.76	+1.3
3,923,645	+		HGI48_RS17525	0.76	+0.7
3,923,645	+		HGI48_RS17525	0.76	+0.2
3,923,645	+		HGI48_RS17525	0.76	+0.3
3,923,645	+		HGI48_RS17525	0.76	+0.0
3,923,646	-		HGI48_RS17525	0.76	-2.1
3,923,646	-		HGI48_RS17525	0.76	+0.7
3,923,646	-		HGI48_RS17525	0.76	-1.6
3,923,646	-		HGI48_RS17525	0.76	+1.1
3,923,646	-		HGI48_RS17525	0.76	+0.5
3,923,686	+		HGI48_RS17525	0.82	+0.9
3,923,686	+		HGI48_RS17525	0.82	+0.9
3,923,793	+				+0.3
3,923,793	+				+0.3
3,923,793	+				-1.1
3,923,793	+				-0.4
3,923,793	+				-0.3
3,923,794	-				+0.5
3,923,794	-				+0.1
3,923,794	-				-0.5
3,923,794	-				-0.9
3,923,795	+				+0.3
3,923,795	+				-0.5
3,923,796	-				-0.7
3,923,796	-				+0.3
3,923,796	-				+0.3
3,923,803	+				+0.1
3,923,804	-				-0.7
3,923,854	+				-0.7
3,923,855	-				-0.5
3,923,855	-				-1.5
3,923,855	-				-1.7
3,923,859	+				+1.5
3,923,859	+				-0.1
3,923,859	+				-0.5
3,923,859	+				+0.2
3,923,859	+				+0.4
3,923,860	-				-2.1
3,923,871	+				-0.4
3,923,871	+				-0.9
3,923,871	+				-0.5
3,923,872	-				+0.5
3,923,872	-				-0.7
3,923,892	+				-2.1
3,923,892	+				-1.9
3,923,893	-				+0.4
3,923,893	-				-1.0
3,923,909	+				+0.3
3,923,909	+				+0.5
3,923,910	-				+1.9
3,923,910	-				+0.4
3,924,096	-		HGI48_RS17530	0.49	+1.1
3,924,096	-		HGI48_RS17530	0.49	-1.7
3,924,216	+		HGI48_RS17530	0.75	-1.5
3,924,216	+		HGI48_RS17530	0.75	-0.5
3,924,578	+		HGI48_RS17535	0.55	+1.1
3,924,578	+		HGI48_RS17535	0.55	-0.7
3,924,578	+		HGI48_RS17535	0.55	-0.4
3,924,578	+		HGI48_RS17535	0.55	-0.3
3,924,578	+		HGI48_RS17535	0.55	-1.0
3,924,578	+		HGI48_RS17535	0.55	+0.9
3,924,579	-		HGI48_RS17535	0.55	-1.1
3,924,611	-		HGI48_RS17535	0.62	+0.1
3,924,614	+		HGI48_RS17535	0.63	+0.4
3,924,657	+		HGI48_RS17535	0.73	-0.7
3,924,740	+				-2.1
3,924,818	+				-0.7
3,924,882	-				-1.1
3,924,884	+				+0.1
3,924,885	-				-0.9
3,924,885	-				-0.1
3,924,885	-				+0.3
3,924,898	-				-0.7
3,925,071	-		HGI48_RS17540	0.11	-0.1
3,925,118	+		HGI48_RS17540	0.16	+0.3
3,925,118	+		HGI48_RS17540	0.16	-1.6
3,925,118	+				+0.3
3,925,119	-		HGI48_RS17540	0.16	+1.2
3,925,119	-		HGI48_RS17540	0.16	+0.9
3,925,127	+				-0.7
3,925,388	-		HGI48_RS17540	0.43	-1.1
3,925,393	+		HGI48_RS17540	0.44	-2.3
3,925,393	+		HGI48_RS17540	0.44	+0.7
3,925,393	+		HGI48_RS17540	0.44	+0.6
3,925,393	+				+0.3
3,925,393	+		HGI48_RS17540	0.44	-2.3
3,925,393	+		HGI48_RS17540	0.44	-0.3
3,925,394	-		HGI48_RS17540	0.44	+0.7
3,925,394	-		HGI48_RS17540	0.44	-1.1
3,925,394	-		HGI48_RS17540	0.44	-0.7
3,925,394	-		HGI48_RS17540	0.44	-0.3
3,925,394	-		HGI48_RS17540	0.44	-0.4
3,925,394	-		HGI48_RS17540	0.44	-0.5
3,925,397	+		HGI48_RS17540	0.44	+0.9
3,925,398	-		HGI48_RS17540	0.44	+0.6
3,925,398	-		HGI48_RS17540	0.44	-2.1
3,925,461	+		HGI48_RS17540	0.51	-0.6
3,925,462	-		HGI48_RS17540	0.51	-1.4
3,925,462	-		HGI48_RS17540	0.51	+0.9
3,925,462	-		HGI48_RS17540	0.51	+0.9
3,925,493	-		HGI48_RS17540	0.54	-0.9
3,925,541	+		HGI48_RS17540	0.59	-0.7
3,925,661	+		HGI48_RS17540	0.71	-0.4
3,925,661	+				+1.9
3,925,755	-		HGI48_RS17540	0.81	+0.9
3,925,760	+		HGI48_RS17540	0.81	-0.1
3,925,760	+				-0.1
3,925,761	-		HGI48_RS17540	0.81	-0.1
3,925,761	-		HGI48_RS17540	0.81	-0.4
3,925,761	-				+0.3
3,925,761	-		HGI48_RS17540	0.81	-2.1
3,925,761	-		HGI48_RS17540	0.81	-0.7
3,925,761	-				+0.9