Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17310

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,874,831	+				+0.4
3,874,836	+				-0.7
3,874,836	+				+1.2
3,874,836	+				-0.7
3,874,837	-				-1.2
3,874,838	+				+1.6
3,874,846	+				-0.6
3,874,846	+				+0.7
3,874,846	+				+0.2
3,874,846	+				-1.0
3,874,847	-				-0.7
3,874,847	-				+0.6
3,874,872	+				+0.1
3,874,872	+				-0.2
3,874,872	+				-1.2
3,874,872	+				+0.8
3,874,872	+				+0.1
3,874,872	+				-1.2
3,874,872	+				-0.7
3,874,872	+				-1.0
3,874,872	+				-0.5
3,874,873	-				+1.3
3,874,873	-				+0.2
3,874,873	-				+1.6
3,874,873	-				+0.5
3,874,873	-				-0.2
3,874,892	+				-0.2
3,874,893	-				-0.0
3,874,893	-				-0.4
3,874,895	+				-1.7
3,874,895	+				+0.8
3,874,895	+				-1.0
3,874,959	+		HGI48_RS17300	0.23	+0.1
3,874,960	-		HGI48_RS17300	0.24	-0.0
3,874,960	-		HGI48_RS17300	0.24	+0.6
3,874,960	-		HGI48_RS17300	0.24	+0.8
3,874,960	-		HGI48_RS17300	0.24	-0.6
3,875,035	+		HGI48_RS17300	0.44	+0.5
3,875,035	+		HGI48_RS17300	0.44	-0.3
3,875,035	+		HGI48_RS17300	0.44	+0.2
3,875,035	+		HGI48_RS17300	0.44	-1.3
3,875,035	+		HGI48_RS17300	0.44	-0.7
3,875,035	+		HGI48_RS17300	0.44	-0.2
3,875,036	-		HGI48_RS17300	0.44	-0.7
3,875,036	-		HGI48_RS17300	0.44	-1.1
3,875,072	+		HGI48_RS17300	0.54	-0.3
3,875,073	-		HGI48_RS17300	0.54	+0.0
3,875,105	+		HGI48_RS17300	0.63	-0.2
3,875,106	-		HGI48_RS17300	0.63	-1.7
3,875,106	-				-0.2
3,875,137	+		HGI48_RS17300	0.72	-1.0
3,875,137	+		HGI48_RS17300	0.72	+0.8
3,875,137	+				+2.6
3,875,138	-		HGI48_RS17300	0.72	-0.5
3,875,138	-		HGI48_RS17300	0.72	-1.2
3,875,138	-		HGI48_RS17300	0.72	-0.3
3,875,184	+		HGI48_RS17300	0.84	-0.3
3,875,184	+		HGI48_RS17300	0.84	-0.5
3,875,184	+		HGI48_RS17300	0.84	-1.2
3,875,184	+		HGI48_RS17300	0.84	-1.2
3,875,184	+		HGI48_RS17300	0.84	-0.7
3,875,184	+		HGI48_RS17300	0.84	-1.3
3,875,184	+		HGI48_RS17300	0.84	+0.4
3,875,185	-		HGI48_RS17300	0.85	+0.1
3,875,185	-		HGI48_RS17300	0.85	+1.7
3,875,185	-				+1.8
3,875,185	-		HGI48_RS17300	0.85	-1.0
3,875,185	-		HGI48_RS17300	0.85	-0.2
3,875,281	+				-0.1
3,875,281	+				-0.5
3,875,282	-				+0.3
3,875,282	-				+0.8
3,875,318	-		HGI48_RS17305	0.12	-0.2
3,875,387	+		HGI48_RS17305	0.37	+1.2
3,875,387	+		HGI48_RS17305	0.37	-1.2
3,875,387	+				+1.6
3,875,388	-		HGI48_RS17305	0.37	+2.1
3,875,401	+		HGI48_RS17305	0.42	+1.3
3,875,402	-		HGI48_RS17305	0.42	-0.4
3,875,412	-		HGI48_RS17305	0.46	-1.2
3,875,559	+				+0.1
3,875,559	+				+0.3
3,875,560	-				+0.4
3,875,586	+				-2.3
3,875,586	+				+0.1
3,875,586	+				-0.5
3,875,587	-				+1.4
3,875,601	+				-2.4
3,875,601	+				+1.4
3,875,601	+				-0.7
3,875,602	-				-1.5
3,875,602	-				-1.5
3,875,602	-				+0.4
3,875,602	-				+0.4
3,875,602	-				-0.3
3,875,602	-				-0.7
3,875,602	-				-0.4
3,875,602	-				+1.3
3,875,616	+				+0.3
3,875,616	+				-1.5
3,875,616	+				-0.9
3,875,616	+				+0.5
3,875,616	+				+2.4
3,875,617	-				-0.4
3,875,617	-				-0.4
3,875,617	-				+0.4
3,875,631	+				-1.5
3,875,631	+				+2.0
3,875,632	-				-0.2
3,875,632	-				+0.8
3,875,666	+				+1.5
3,875,667	-				-1.6
3,876,190	+				-0.7
3,876,428	+				+0.0
3,876,432	+				-1.7
3,876,446	-				+0.4
3,876,446	-				+0.1
3,876,449	-				+0.6
3,876,455	+				-0.3
3,876,455	+				-0.2
3,876,456	-				+0.2
3,876,461	+				+0.4
3,876,461	+				-0.6
3,876,461	+				-0.7
3,876,461	+				+0.4
3,876,461	+				-0.2
3,876,461	+				+0.3
3,876,461	+				-2.2
3,876,462	-				+0.1
3,876,462	-				-0.2
3,876,462	-				-0.1
3,876,462	-				+0.1
3,876,474	+				+1.8
3,876,474	+				+1.2
3,876,475	-				-0.2
3,876,475	-				-0.1
3,876,824	+		HGI48_RS17315	0.11	+0.3
3,876,875	+		HGI48_RS17315	0.13	+0.0
3,876,875	+		HGI48_RS17315	0.13	-0.1
3,876,875	+		HGI48_RS17315	0.13	-1.3
3,876,979	+		HGI48_RS17315	0.18	+0.5
3,876,985	+		HGI48_RS17315	0.18	-0.1
3,876,985	+		HGI48_RS17315	0.18	+0.3
3,876,985	+		HGI48_RS17315	0.18	-1.2
3,876,986	-		HGI48_RS17315	0.18	-1.7
3,876,986	-		HGI48_RS17315	0.18	-1.0
3,876,988	+		HGI48_RS17315	0.18	-1.2
3,876,988	+		HGI48_RS17315	0.18	-0.9
3,876,988	+				+0.3
3,877,079	+		HGI48_RS17315	0.22	-0.3
3,877,079	+		HGI48_RS17315	0.22	+0.5
3,877,079	+		HGI48_RS17315	0.22	-0.7
3,877,079	+		HGI48_RS17315	0.22	+0.3
3,877,079	+		HGI48_RS17315	0.22	-2.0
3,877,116	-		HGI48_RS17315	0.23	-0.3
3,877,116	-		HGI48_RS17315	0.23	-1.0
3,877,140	+		HGI48_RS17315	0.24	+0.4
3,877,270	+		HGI48_RS17315	0.29	+0.4
3,877,271	-		HGI48_RS17315	0.29	-1.3
3,877,271	-				+0.3
3,877,271	-		HGI48_RS17315	0.29	-1.5
3,877,378	+				+0.3
3,877,378	+		HGI48_RS17315	0.34	-1.7
3,877,379	-				+0.3