Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17215

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,857,576	+				+2.4
3,857,623	+		HGI48_RS17210	0.78	-2.2
3,857,623	+				-0.2
3,857,624	-		HGI48_RS17210	0.78	-1.0
3,857,624	-				+2.2
3,857,787	-		HGI48_RS17210	0.82	+0.7
3,857,787	-		HGI48_RS17210	0.82	-0.2
3,858,015	-		HGI48_RS17210	0.88	-1.2
3,858,015	-		HGI48_RS17210	0.88	+1.2
3,858,015	-		HGI48_RS17210	0.88	+0.5
3,858,023	+		HGI48_RS17210	0.89	+0.5
3,858,036	+		HGI48_RS17210	0.89	+0.7
3,858,036	+				-0.2
3,858,037	-		HGI48_RS17210	0.89	+0.3
3,858,307	-				-0.4
3,858,449	+				-0.2
3,858,449	+				-1.2
3,858,449	+				-0.8
3,858,449	+				-3.1
3,858,450	-				-0.8
3,858,450	-				-1.2
3,858,470	-				-2.1
3,858,471	+				-0.3
3,858,471	+				-0.8
3,858,471	+				-1.2
3,858,471	+				-0.6
3,858,471	+				-0.8
3,858,471	+				-2.3
3,858,471	+				-1.5
3,858,471	+				-0.5
3,858,471	+				-1.5
3,858,471	+				+1.0
3,858,472	-				-1.8
3,858,472	-				+1.2
3,858,472	-				-0.8
3,858,472	-				-1.5
3,858,620	+		HGI48_RS17215	0.10	+1.2
3,858,620	+		HGI48_RS17215	0.10	+0.2
3,858,621	-		HGI48_RS17215	0.10	+0.6
3,858,657	+		HGI48_RS17215	0.12	+0.2
3,858,657	+		HGI48_RS17215	0.12	+1.4
3,858,657	+		HGI48_RS17215	0.12	+1.0
3,858,657	+		HGI48_RS17215	0.12	-1.5
3,858,658	-		HGI48_RS17215	0.12	-0.5
3,858,658	-				+1.8
3,858,658	-		HGI48_RS17215	0.12	-1.0
3,858,738	+		HGI48_RS17215	0.17	+2.3
3,858,738	+		HGI48_RS17215	0.17	-0.3
3,858,738	+		HGI48_RS17215	0.17	+0.2
3,858,738	+				-0.8
3,858,738	+		HGI48_RS17215	0.17	-1.5
3,858,738	+		HGI48_RS17215	0.17	+0.4
3,858,738	+		HGI48_RS17215	0.17	-1.4
3,858,739	-		HGI48_RS17215	0.17	-1.2
3,858,742	+		HGI48_RS17215	0.17	-2.2
3,858,742	+				-0.8
3,858,742	+		HGI48_RS17215	0.17	-1.5
3,858,742	+		HGI48_RS17215	0.17	-0.4
3,858,743	-		HGI48_RS17215	0.17	-1.1
3,858,743	-		HGI48_RS17215	0.17	-1.2
3,858,744	+				-0.8
3,858,745	-		HGI48_RS17215	0.17	+0.1
3,858,754	+				-0.2
3,858,795	-		HGI48_RS17215	0.20	-1.8
3,859,057	+				+0.2
3,859,058	-		HGI48_RS17215	0.35	+0.4
3,859,079	+				-0.8
3,859,079	+		HGI48_RS17215	0.37	-1.5
3,859,079	+		HGI48_RS17215	0.37	-0.9
3,859,079	+		HGI48_RS17215	0.37	-1.2
3,859,079	+				+0.8
3,859,079	+		HGI48_RS17215	0.37	+0.8
3,859,079	+		HGI48_RS17215	0.37	+1.1
3,859,080	-		HGI48_RS17215	0.37	+0.4
3,859,080	-		HGI48_RS17215	0.37	-2.3
3,859,080	-		HGI48_RS17215	0.37	+0.8
3,859,080	-				-0.2
3,859,197	+		HGI48_RS17215	0.44	-1.4
3,859,197	+				-0.8
3,859,197	+				-0.8
3,859,197	+		HGI48_RS17215	0.44	-1.3
3,859,197	+		HGI48_RS17215	0.44	-0.0
3,859,197	+		HGI48_RS17215	0.44	-1.5
3,859,197	+		HGI48_RS17215	0.44	+1.1
3,859,197	+		HGI48_RS17215	0.44	-0.5
3,859,197	+		HGI48_RS17215	0.44	-0.3
3,859,197	+		HGI48_RS17215	0.44	-1.2
3,859,198	-				+0.8
3,859,198	-		HGI48_RS17215	0.44	-1.4
3,859,198	-		HGI48_RS17215	0.44	-2.5
3,859,198	-		HGI48_RS17215	0.44	+0.2
3,859,198	-		HGI48_RS17215	0.44	-0.2
3,859,198	-				-0.8
3,859,198	-		HGI48_RS17215	0.44	+1.2
3,859,198	-		HGI48_RS17215	0.44	-0.2
3,859,198	-		HGI48_RS17215	0.44	+0.2
3,859,198	-		HGI48_RS17215	0.44	-1.2
3,859,200	+		HGI48_RS17215	0.44	-0.2
3,859,200	+		HGI48_RS17215	0.44	-0.8
3,859,200	+				-0.8
3,859,200	+		HGI48_RS17215	0.44	+0.4
3,859,200	+		HGI48_RS17215	0.44	-1.5
3,859,200	+		HGI48_RS17215	0.44	-2.3
3,859,200	+				-0.8
3,859,200	+		HGI48_RS17215	0.44	-1.2
3,859,201	-		HGI48_RS17215	0.44	+1.7
3,859,201	-				-0.8
3,859,201	-		HGI48_RS17215	0.44	+0.3
3,859,236	+		HGI48_RS17215	0.46	-1.4
3,859,236	+				+0.2
3,859,236	+		HGI48_RS17215	0.46	-1.0
3,859,299	+				+0.8
3,859,427	-		HGI48_RS17215	0.57	-0.5
3,859,528	-				+2.2
3,859,566	+		HGI48_RS17215	0.65	-1.2
3,859,566	+		HGI48_RS17215	0.65	-2.9
3,859,566	+		HGI48_RS17215	0.65	-2.9
3,859,567	-		HGI48_RS17215	0.65	-0.9
3,859,567	-		HGI48_RS17215	0.65	-2.0
3,859,567	-		HGI48_RS17215	0.65	-1.5
3,859,632	+		HGI48_RS17215	0.69	+1.2
3,859,687	+				-0.2
3,859,688	-		HGI48_RS17215	0.72	-0.5
3,859,707	+		HGI48_RS17215	0.73	+0.8
3,859,708	-				+1.8
3,859,729	+				+0.8
3,859,729	+				-0.2
3,859,729	+		HGI48_RS17215	0.74	-0.2
3,859,729	+		HGI48_RS17215	0.74	-1.0
3,859,729	+		HGI48_RS17215	0.74	+0.8
3,859,729	+		HGI48_RS17215	0.74	-2.9
3,859,729	+		HGI48_RS17215	0.74	+0.1
3,859,729	+				-0.2
3,859,730	-		HGI48_RS17215	0.74	+1.1
3,859,730	-		HGI48_RS17215	0.74	+0.0
3,859,730	-		HGI48_RS17215	0.74	-0.6
3,859,730	-		HGI48_RS17215	0.74	-2.3
3,859,730	-				-0.8
3,859,730	-		HGI48_RS17215	0.74	-1.2
3,859,755	+		HGI48_RS17215	0.76	+0.8
3,859,755	+		HGI48_RS17215	0.76	-1.9
3,859,755	+				-0.2
3,859,782	-				+1.6
3,859,815	+		HGI48_RS17215	0.79	-1.2
3,859,815	+		HGI48_RS17215	0.79	-2.3
3,859,852	+				-0.8
3,859,959	+		HGI48_RS17215	0.88	-0.3
3,859,959	+		HGI48_RS17215	0.88	-3.3
3,859,959	+		HGI48_RS17215	0.88	-2.0
3,859,960	-				+0.8
3,859,960	-		HGI48_RS17215	0.88	-0.2
3,859,960	-		HGI48_RS17215	0.88	-0.2
3,859,960	-		HGI48_RS17215	0.88	-0.9
3,859,960	-				-0.8
3,859,962	+		HGI48_RS17215	0.88	-1.8
3,860,066	+				-0.2
3,860,067	-				-0.5
3,860,232	+				-0.6
3,860,232	+				-0.2
3,860,232	+				-0.8
3,860,233	-				-0.2
3,860,263	+				+0.8
3,860,263	+				-1.8
3,860,263	+				+1.0
3,860,288	+				-1.5
3,860,288	+				-0.2
3,860,288	+				+0.7
3,860,288	+				-1.8
3,860,288	+				-1.8
3,860,288	+				+0.2
3,860,288	+				+0.8
3,860,289	-				+0.6
3,860,289	-				-1.5
3,860,289	-				-1.8
3,860,289	-				-2.2
3,860,294	+				-1.2
3,860,294	+				-0.8
3,860,294	+				-0.5
3,860,296	+				+0.8
3,860,312	+				-0.0
3,860,312	+				+0.3
3,860,313	-				+0.3
3,860,313	-				-0.2
3,860,313	-				+0.2
3,860,325	+				+0.1
3,860,325	+				-1.8
3,860,325	+				-0.8
3,860,325	+				-1.3
3,860,325	+				-1.2
3,860,325	+				+2.0
3,860,326	-				+0.1
3,860,326	-				-1.0
3,860,327	+				+0.2
3,860,327	+				-2.2
3,860,327	+				-0.2
3,860,328	-				-1.0
3,860,328	-				+0.1
3,860,328	-				-2.2
3,860,328	-				-1.5
3,860,328	-				+0.1
3,860,328	-				+0.5
3,860,328	-				-2.3
3,860,331	+				-0.5
3,860,331	+				-2.5
3,860,332	-				-1.2
3,860,332	-				+0.6
3,860,438	+				-1.8
3,860,438	+				-1.8
3,860,438	+				-0.3
3,860,470	+				-0.2
3,860,470	+				+0.5
3,860,470	+				-0.1
3,860,476	+				-0.9
3,860,476	+				-2.2
3,860,476	+				+0.0
3,860,477	-				+0.8
3,860,481	+				-1.0
3,860,481	+				+0.2
3,860,516	+				-0.8
3,860,529	+				+0.2
3,860,579	+				+0.6
3,860,763	+				+0.8
3,860,763	+		HGI48_RS17220	0.31	+0.2
3,860,764	-		HGI48_RS17220	0.31	+0.7
3,860,764	-		HGI48_RS17220	0.31	-1.5
3,860,764	-		HGI48_RS17220	0.31	+0.0
3,860,795	+		HGI48_RS17220	0.36	-0.6
3,860,811	+		HGI48_RS17220	0.38	+0.9
3,860,812	-		HGI48_RS17220	0.39	-0.7
3,860,821	+		HGI48_RS17220	0.40	-1.4
3,860,821	+		HGI48_RS17220	0.40	+0.3
3,860,821	+		HGI48_RS17220	0.40	-0.8
3,860,821	+				-0.8
3,860,821	+		HGI48_RS17220	0.40	+0.4
3,860,821	+		HGI48_RS17220	0.40	-1.9
3,860,821	+		HGI48_RS17220	0.40	+0.1
3,860,822	-		HGI48_RS17220	0.40	-0.3
3,860,822	-				+1.8
3,860,822	-				-0.8
3,860,822	-		HGI48_RS17220	0.40	-1.8
3,860,822	-		HGI48_RS17220	0.40	+0.3
3,860,822	-		HGI48_RS17220	0.40	+0.2
3,860,881	+		HGI48_RS17220	0.49	-2.0
3,860,881	+		HGI48_RS17220	0.49	+0.1
3,860,881	+		HGI48_RS17220	0.49	-0.4
3,860,881	+		HGI48_RS17220	0.49	+0.1
3,860,881	+		HGI48_RS17220	0.49	-0.2
3,860,882	-		HGI48_RS17220	0.50	-0.9
3,860,886	+		HGI48_RS17220	0.50	+0.4
3,860,887	-		HGI48_RS17220	0.50	-0.8
3,860,936	+		HGI48_RS17220	0.58	+0.8
3,860,982	+		HGI48_RS17220	0.65	+0.0
3,860,982	+		HGI48_RS17220	0.65	-0.3
3,860,982	+		HGI48_RS17220	0.65	-0.3
3,860,982	+		HGI48_RS17220	0.65	-0.5
3,860,982	+		HGI48_RS17220	0.65	-3.4
3,860,982	+		HGI48_RS17220	0.65	+0.5
3,860,982	+		HGI48_RS17220	0.65	-1.6
3,860,982	+		HGI48_RS17220	0.65	-1.5
3,860,982	+		HGI48_RS17220	0.65	+0.1
3,860,982	+				-0.8
3,860,982	+		HGI48_RS17220	0.65	+0.1
3,860,982	+		HGI48_RS17220	0.65	-0.5
3,860,982	+		HGI48_RS17220	0.65	-1.2
3,860,982	+		HGI48_RS17220	0.65	-0.2
3,860,982	+		HGI48_RS17220	0.65	+0.0
3,860,983	-		HGI48_RS17220	0.65	-0.4
3,860,983	-		HGI48_RS17220	0.65	-1.5
3,860,983	-		HGI48_RS17220	0.65	-0.8
3,860,983	-		HGI48_RS17220	0.65	-0.7
3,860,983	-		HGI48_RS17220	0.65	-0.0
3,861,106	-		HGI48_RS17220	0.85	-1.2
3,861,108	+		HGI48_RS17220	0.85	-1.2
3,861,108	+		HGI48_RS17220	0.85	+0.2
3,861,132	+		HGI48_RS17220	0.89	-2.0
3,861,157	-				-0.4