Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17130

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,837,641	+		HGI48_RS17120	0.77	-0.4
3,837,641	+		HGI48_RS17120	0.77	-0.2
3,837,642	-		HGI48_RS17120	0.77	+0.7
3,837,642	-		HGI48_RS17120	0.77	-1.2
3,837,642	-		HGI48_RS17120	0.77	-0.2
3,837,757	-		HGI48_RS17120	0.85	-0.4
3,837,757	-		HGI48_RS17120	0.85	-0.2
3,837,985	+				+0.1
3,837,986	-				+0.8
3,837,986	-				+0.3
3,838,003	+				+0.5
3,838,004	-				+1.6
3,838,004	-				+0.8
3,838,004	-				-0.8
3,838,037	-				-0.5
3,838,040	+				-1.2
3,838,040	+				-0.4
3,838,040	+				-0.9
3,838,040	+				+0.4
3,838,040	+				-0.8
3,838,040	+				-1.0
3,838,040	+				-0.9
3,838,040	+				-1.5
3,838,040	+				-1.8
3,838,040	+				-0.1
3,838,040	+				-0.2
3,838,041	-				+0.0
3,838,041	-				-0.5
3,838,041	-				-0.2
3,838,041	-				+0.1
3,838,041	-				+0.8
3,838,041	-				+0.5
3,838,058	+				+0.2
3,838,061	+				-2.2
3,838,061	+				+0.2
3,838,062	-				+1.2
3,838,071	+				-1.5
3,838,095	+				+0.7
3,838,096	-				-0.1
3,838,096	-				-0.3
3,838,096	-				-0.5
3,838,102	-				+1.2
3,838,102	-				-1.8
3,838,131	+				+0.8
3,838,145	+				-1.3
3,838,145	+				-0.2
3,838,145	+				-0.8
3,838,145	+				-0.7
3,838,145	+				-0.2
3,838,145	+				+1.2
3,838,146	-				-0.3
3,838,146	-				-1.5
3,838,146	-				-0.8
3,838,146	-				-1.9
3,838,146	-				-1.2
3,838,437	-		HGI48_RS17125	0.87	-0.2
3,838,470	+				-0.2
3,838,470	+				-0.9
3,838,470	+				-0.0
3,838,470	+				-3.0
3,838,471	-				+1.2
3,838,471	-				+0.0
3,838,471	-				+1.4
3,838,504	-				-0.8
3,838,504	-				-0.5
3,838,504	-				-0.5
3,838,505	+				-0.2
3,838,505	+				-1.5
3,838,506	-				+0.4
3,838,569	-				-1.8
3,838,569	-				+0.8
3,838,604	+				-0.3
3,838,604	+				+0.7
3,838,605	-				+0.1
3,838,618	+				-0.3
3,838,626	+				-0.5
3,838,626	+				-1.2
3,838,627	-				-1.0
3,838,627	-				-0.7
3,838,851	+		HGI48_RS17130	0.61	-0.0
3,838,851	+		HGI48_RS17130	0.61	-0.5
3,838,851	+				-0.2
3,838,851	+		HGI48_RS17130	0.61	-0.2
3,838,851	+		HGI48_RS17130	0.61	-1.2
3,838,851	+		HGI48_RS17130	0.61	+0.3
3,838,852	-		HGI48_RS17130	0.61	+0.2
3,838,852	-		HGI48_RS17130	0.61	+0.2
3,838,982	+				+1.2
3,838,982	+				+0.2
3,838,982	+				+1.2
3,838,982	+				+1.1
3,838,982	+				+1.7
3,838,983	-				-0.3
3,838,983	-				-1.2
3,838,983	-				+0.4
3,838,983	-				-0.4
3,838,983	-				-0.9
3,838,983	-				-1.0
3,838,984	+				-1.2
3,838,984	+				-0.2
3,838,985	-				-1.5
3,839,000	-				+0.2
3,839,003	-				-0.1
3,839,003	-				-0.1
3,839,021	-				-2.3
3,839,056	-				+0.1
3,839,083	-				-0.2
3,839,095	+				-0.1
3,839,096	-				-0.5
3,839,112	+				-1.2
3,839,198	+		HGI48_RS17135	0.23	-0.8
3,839,198	+		HGI48_RS17135	0.23	-1.5
3,839,198	+		HGI48_RS17135	0.23	-0.9
3,839,199	-		HGI48_RS17135	0.24	-0.6
3,839,199	-		HGI48_RS17135	0.24	-0.2
3,839,199	-		HGI48_RS17135	0.24	-0.4
3,839,235	+		HGI48_RS17135	0.34	+0.2
3,839,236	-		HGI48_RS17135	0.34	-0.4
3,839,280	+		HGI48_RS17135	0.46	-0.2
3,839,280	+		HGI48_RS17135	0.46	+0.4
3,839,281	-				-0.8
3,839,281	-		HGI48_RS17135	0.46	-0.5
3,839,281	-		HGI48_RS17135	0.46	-1.0
3,839,467	+				-0.4
3,839,467	+				+0.8
3,839,467	+				-0.2
3,839,468	-				+0.7
3,839,468	-				+1.6
3,839,468	-				-0.8
3,839,468	-				+0.4
3,839,468	-				-1.3
3,839,473	+				-0.8
3,839,474	-				-0.2
3,839,474	-				-0.5
3,839,474	-				+0.0
3,839,481	+				+0.6
3,839,589	-		HGI48_RS17140	0.11	-0.9
3,839,692	+		HGI48_RS17140	0.58	+0.4
3,839,692	+		HGI48_RS17140	0.58	-1.2
3,839,692	+		HGI48_RS17140	0.58	+0.8
3,839,692	+		HGI48_RS17140	0.58	-2.2
3,839,693	-		HGI48_RS17140	0.58	-0.5
3,839,693	-		HGI48_RS17140	0.58	+0.6
3,839,693	-				+2.2
3,839,728	+		HGI48_RS17140	0.74	+0.5
3,839,729	-		HGI48_RS17140	0.75	-0.4
3,839,729	-		HGI48_RS17140	0.75	+0.4
3,839,750	+		HGI48_RS17140	0.84	+0.8
3,839,753	+		HGI48_RS17140	0.86	-1.8
3,839,753	+		HGI48_RS17140	0.86	+0.5
3,839,753	+		HGI48_RS17140	0.86	-0.2
3,839,753	+		HGI48_RS17140	0.86	-1.0
3,839,753	+				+0.2
3,839,753	+		HGI48_RS17140	0.86	-1.2
3,839,753	+				+1.6
3,839,753	+		HGI48_RS17140	0.86	+0.6
3,839,753	+		HGI48_RS17140	0.86	-0.8
3,839,754	-		HGI48_RS17140	0.86	-1.2
3,839,754	-		HGI48_RS17140	0.86	-0.3
3,839,754	-		HGI48_RS17140	0.86	+0.0
3,839,754	-		HGI48_RS17140	0.86	+0.8
3,839,754	-		HGI48_RS17140	0.86	-1.2
3,839,754	-		HGI48_RS17140	0.86	-0.8
3,839,754	-		HGI48_RS17140	0.86	-1.5
3,839,754	-		HGI48_RS17140	0.86	-0.2
3,839,754	-		HGI48_RS17140	0.86	-0.3
3,839,754	-		HGI48_RS17140	0.86	-1.5
3,839,754	-		HGI48_RS17140	0.86	-0.4
3,839,757	+		HGI48_RS17140	0.88	-0.5