Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17005

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,801,848	+		HGI48_RS17000	0.62	-1.5
3,802,138	-		HGI48_RS17000	0.82	+0.1
3,802,138	-		HGI48_RS17000	0.82	+0.6
3,802,138	-		HGI48_RS17000	0.82	-0.9
3,802,358	+				-0.3
3,802,359	-				-0.2
3,802,375	-				+0.2
3,802,384	+				-0.8
3,802,385	-				-0.9
3,802,401	+				+0.7
3,802,401	+				-0.1
3,802,404	+				-0.4
3,802,405	-				+0.8
3,802,420	+				-0.4
3,802,430	-				-1.1
3,802,431	+				+1.3
3,802,431	+				+0.6
3,802,432	-				+0.4
3,802,432	-				+0.3
3,802,466	+				-0.6
3,802,467	-				+0.1
3,802,467	-				-2.2
3,802,467	-				-1.5
3,802,467	-				-2.2
3,802,469	+				-0.5
3,802,469	+				+0.2
3,802,470	-				+0.4
3,802,475	+				+0.2
3,802,499	+				-2.2
3,802,500	-				-1.0
3,802,513	+				+0.2
3,802,670	+				-0.2
3,802,670	+				-0.3
3,802,671	-				-1.8
3,802,692	+				-0.4
3,802,692	+				+0.0
3,802,692	+				+0.2
3,802,692	+				-0.8
3,802,693	-				+0.8
3,802,705	+				-2.0
3,802,705	+				-0.3
3,802,705	+				-1.5
3,802,706	-				+0.2
3,802,720	-				-0.3
3,802,724	+				-0.8
3,802,724	+				-0.9
3,802,724	+				+1.4
3,802,725	-				-0.4
3,802,725	-				+0.2
3,802,725	-				-0.6
3,802,731	+				+0.2
3,802,764	+				+0.0
3,802,765	-				+1.2
3,802,813	+				-0.0
3,802,814	-				+1.4
3,802,916	-		HGI48_RS17005	0.12	+1.1
3,802,938	+		HGI48_RS17005	0.15	-1.5
3,802,986	+		HGI48_RS17005	0.21	+0.1
3,802,992	+		HGI48_RS17005	0.22	-1.5
3,802,993	-		HGI48_RS17005	0.22	-1.6
3,803,159	-		HGI48_RS17005	0.45	-0.5
3,803,172	+		HGI48_RS17005	0.47	-1.0
3,803,172	+		HGI48_RS17005	0.47	-2.3
3,803,172	+		HGI48_RS17005	0.47	-0.2
3,803,305	-		HGI48_RS17005	0.65	-2.2
3,803,314	+		HGI48_RS17005	0.66	-0.7
3,803,557	+				+1.4
3,803,557	+				-0.8
3,803,558	-				-2.6
3,803,558	-				-0.5
3,803,558	-				-2.2
3,803,558	-				-0.5
3,803,737	-				-0.8
3,803,737	-				-0.4
3,803,750	-		HGI48_RS17010	0.10	-1.1
3,803,756	-		HGI48_RS17010	0.10	-2.3
3,803,870	+		HGI48_RS17010	0.17	+0.6
3,803,870	+		HGI48_RS17010	0.17	-0.5
3,803,871	-		HGI48_RS17010	0.17	+0.8
3,803,871	-		HGI48_RS17010	0.17	-0.8
3,803,871	-				+0.8
3,803,871	-		HGI48_RS17010	0.17	-0.3
3,803,871	-		HGI48_RS17010	0.17	-0.2
3,803,875	+		HGI48_RS17010	0.17	-0.5
3,803,908	+		HGI48_RS17010	0.19	+0.6
3,803,908	+		HGI48_RS17010	0.19	-0.5
3,803,908	+		HGI48_RS17010	0.19	-0.2
3,803,909	-		HGI48_RS17010	0.19	-0.6
3,803,909	-		HGI48_RS17010	0.19	-0.1
3,803,909	-		HGI48_RS17010	0.19	-0.1
3,804,039	+		HGI48_RS17010	0.27	+0.6
3,804,229	+				-0.8
3,804,229	+		HGI48_RS17010	0.38	-0.3
3,804,230	-		HGI48_RS17010	0.38	+0.2
3,804,230	-		HGI48_RS17010	0.38	+0.8
3,804,230	-				+2.1
3,804,232	+		HGI48_RS17010	0.38	+0.4
3,804,463	+		HGI48_RS17010	0.52	-0.4
3,804,463	+		HGI48_RS17010	0.52	-1.0
3,804,463	+		HGI48_RS17010	0.52	-0.5
3,804,464	-		HGI48_RS17010	0.52	-0.6
3,804,465	+		HGI48_RS17010	0.52	-1.2
3,804,466	-				+0.2
3,804,466	-		HGI48_RS17010	0.52	-0.3
3,804,466	-		HGI48_RS17010	0.52	-0.2
3,804,492	+		HGI48_RS17010	0.53	+0.2
3,804,492	+		HGI48_RS17010	0.53	-0.8
3,804,492	+		HGI48_RS17010	0.53	+0.1
3,804,539	+		HGI48_RS17010	0.56	-0.4
3,804,539	+		HGI48_RS17010	0.56	-0.6
3,804,539	+		HGI48_RS17010	0.56	+0.3
3,804,540	-		HGI48_RS17010	0.56	+0.3
3,804,540	-		HGI48_RS17010	0.56	-0.3
3,804,540	-		HGI48_RS17010	0.56	+0.0
3,804,540	-		HGI48_RS17010	0.56	-1.2
3,804,540	-				+1.4
3,804,540	-		HGI48_RS17010	0.56	+1.5
3,804,544	+		HGI48_RS17010	0.56	-0.3
3,804,545	-				+0.8