Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16210

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHGI48_RS16205 and HGI48_RS16210 are separated by 168 nucleotidesHGI48_RS16210 and HGI48_RS16215 are separated by 112 nucleotidesHGI48_RS16215 and HGI48_RS16220 are separated by 69 nucleotides HGI48_RS16205: HGI48_RS16205 - 23S ribosomal RNA, at 3,633,626 to 3,636,538 _RS16205 HGI48_RS16210: HGI48_RS16210 - tRNA-Ala, at 3,636,707 to 3,636,782 _RS16210 HGI48_RS16215: HGI48_RS16215 - tRNA-Ile, at 3,636,895 to 3,636,971 _RS16215 HGI48_RS16220: HGI48_RS16220 - 16S ribosomal RNA, at 3,637,041 to 3,638,585 _RS16220 Position (kb) 3636 3637Strain fitness (log2 ratio) -1 0 1at 3635.732 kb on - strand, within HGI48_RS16205

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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3,635,732 - HGI48_RS16205 0.72 -1.3

Or see this region's nucleotide sequence