Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15610

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,508,689	-		HGI48_RS15605	0.35	+0.2
3,508,693	+				+0.7
3,508,789	+		HGI48_RS15605	0.47	-0.5
3,508,790	-		HGI48_RS15605	0.47	-1.7
3,508,790	-				+1.3
3,508,790	-		HGI48_RS15605	0.47	-0.9
3,508,807	+		HGI48_RS15605	0.49	+0.2
3,508,835	+				+0.1
3,508,835	+		HGI48_RS15605	0.53	+1.3
3,508,836	-		HGI48_RS15605	0.53	+1.3
3,509,060	-		HGI48_RS15605	0.81	-1.3
3,509,103	+		HGI48_RS15605	0.87	+0.1
3,509,103	+		HGI48_RS15605	0.87	-2.5
3,509,103	+		HGI48_RS15605	0.87	-0.3
3,509,103	+		HGI48_RS15605	0.87	-1.6
3,509,103	+		HGI48_RS15605	0.87	-1.9
3,509,103	+				-0.3
3,509,104	-		HGI48_RS15605	0.87	-0.9
3,509,104	-		HGI48_RS15605	0.87	+1.0
3,509,104	-		HGI48_RS15605	0.87	-1.3
3,509,104	-				+0.7
3,509,104	-				+0.7
3,509,104	-		HGI48_RS15605	0.87	-0.1
3,509,104	-				+1.1
3,509,104	-		HGI48_RS15605	0.87	-0.4
3,509,104	-		HGI48_RS15605	0.87	-1.6
3,509,104	-		HGI48_RS15605	0.87	-1.2
3,509,226	+				-1.6
3,509,275	+				-2.5
3,509,275	+				+0.7
3,509,275	+				-0.0
3,509,276	-				+0.1
3,509,276	-				-0.5
3,509,276	-				-1.3
3,509,276	-				-1.3
3,509,276	-				+0.3
3,509,276	-				-1.6
3,509,276	-				-1.3
3,509,493	+				-0.3
3,509,493	+				-0.7
3,509,493	+				-0.6
3,509,493	+				-0.0
3,509,493	+				+0.1
3,509,493	+				-0.1
3,509,496	+				-2.6
3,509,497	-				+0.2
3,509,497	-				+0.7
3,509,508	+				+0.5
3,509,509	-				+0.7
3,509,518	-				-0.1
3,509,564	-				+0.7
3,509,564	-				-0.6
3,509,585	-				+0.1
3,509,682	+				-0.9
3,509,682	+				+0.2
3,509,683	-				+0.1
3,509,687	-				-2.3
3,509,701	+				-0.6
3,509,934	+		HGI48_RS15610	0.26	+0.7
3,509,935	-		HGI48_RS15610	0.27	-0.4
3,509,935	-				+0.7
3,510,059	-				+0.7
3,510,153	+		HGI48_RS15610	0.43	-0.1
3,510,154	-		HGI48_RS15610	0.43	-1.3
3,510,154	-		HGI48_RS15610	0.43	+0.9
3,510,209	+		HGI48_RS15610	0.48	-2.1
3,510,210	-		HGI48_RS15610	0.48	-2.1
3,510,349	+		HGI48_RS15610	0.58	-0.0
3,510,351	+		HGI48_RS15610	0.59	+0.9
3,510,351	+		HGI48_RS15610	0.59	-0.3
3,510,351	+		HGI48_RS15610	0.59	-0.4
3,510,351	+		HGI48_RS15610	0.59	-1.8
3,510,352	-		HGI48_RS15610	0.59	+0.7
3,510,352	-				-0.9
3,510,352	-		HGI48_RS15610	0.59	-1.1
3,510,352	-		HGI48_RS15610	0.59	-1.1
3,510,414	+		HGI48_RS15610	0.64	-0.1
3,510,414	+		HGI48_RS15610	0.64	+0.5
3,510,414	+		HGI48_RS15610	0.64	+0.4
3,510,414	+		HGI48_RS15610	0.64	+0.3
3,510,445	+		HGI48_RS15610	0.66	-1.9
3,510,454	-		HGI48_RS15610	0.67	+0.2
3,510,572	+		HGI48_RS15610	0.76	-2.9
3,510,715	+		HGI48_RS15610	0.87	+0.4
3,510,715	+		HGI48_RS15610	0.87	+0.7
3,510,716	-		HGI48_RS15610	0.87	+0.2
3,510,716	-		HGI48_RS15610	0.87	+0.8
3,510,790	+				-0.6
3,510,790	+				-0.1
3,510,790	+				-0.8
3,510,791	-				-2.1
3,510,791	-				-1.6
3,510,887	-				-0.6
3,510,892	+				-0.3
3,510,892	+				+0.7
3,510,892	+				-0.4
3,510,892	+				+0.9
3,510,892	+				-0.3
3,510,893	-				+1.1
3,510,893	-				-1.6
3,510,893	-				+0.1
3,510,893	-				+1.7
3,510,913	-				-0.3
3,510,925	+				-0.5
3,510,937	-				-0.1
3,510,937	-				-0.9
3,511,089	+				-0.3
3,511,123	+		HGI48_RS15615	0.69	-0.6
3,511,123	+		HGI48_RS15615	0.69	-0.5
3,511,124	-		HGI48_RS15615	0.70	-0.9
3,511,139	-		HGI48_RS15615	0.77	+0.7
3,511,139	-		HGI48_RS15615	0.77	-1.3
3,511,185	-				+0.5
3,511,190	-				+0.9
3,511,535	-				+0.7
3,511,620	+				-1.3