Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15140

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,406,839	+		HGI48_RS15135	0.49	+0.3
3,406,840	-		HGI48_RS15135	0.49	-0.4
3,406,985	+		HGI48_RS15135	0.60	-0.3
3,406,985	+		HGI48_RS15135	0.60	-0.7
3,406,986	-				+0.7
3,406,993	+		HGI48_RS15135	0.61	-0.1
3,406,993	+		HGI48_RS15135	0.61	-0.6
3,406,993	+		HGI48_RS15135	0.61	-1.1
3,406,994	-		HGI48_RS15135	0.61	-0.1
3,406,994	-		HGI48_RS15135	0.61	-0.3
3,406,994	-		HGI48_RS15135	0.61	-2.9
3,407,004	+		HGI48_RS15135	0.61	-1.7
3,407,062	+		HGI48_RS15135	0.66	+0.4
3,407,168	+		HGI48_RS15135	0.73	+1.5
3,407,216	+		HGI48_RS15135	0.77	-0.5
3,407,216	+		HGI48_RS15135	0.77	-0.4
3,407,216	+				+0.7
3,407,216	+		HGI48_RS15135	0.77	+1.4
3,407,217	-		HGI48_RS15135	0.77	-1.9
3,407,217	-		HGI48_RS15135	0.77	-0.3
3,407,217	-		HGI48_RS15135	0.77	-1.3
3,407,273	+		HGI48_RS15135	0.81	+0.9
3,407,273	+		HGI48_RS15135	0.81	+0.4
3,407,273	+		HGI48_RS15135	0.81	-1.1
3,407,530	-				+1.2
3,407,567	+				+1.1
3,407,568	-				-2.8
3,407,575	+				+0.3
3,407,575	+				-1.2
3,407,576	-				-0.9
3,407,576	-				+1.2
3,407,576	-				-0.6
3,407,576	-				-0.1
3,407,576	-				+0.2
3,407,576	-				+1.3
3,407,576	-				-0.6
3,407,579	+				+0.7
3,407,579	+				-1.4
3,407,579	+				-0.7
3,407,580	-				-0.9
3,407,580	-				-0.9
3,407,607	+				-0.5
3,407,607	+				+0.7
3,407,607	+				-1.7
3,407,608	-				+1.0
3,407,608	-				+0.3
3,407,669	+				+0.4
3,407,670	-				-1.9
3,407,680	+				+0.2
3,407,681	-				-0.1
3,407,681	-				-1.9
3,407,718	+				+0.2
3,407,721	-				-0.2
3,407,732	-				+0.7
3,407,732	-				+1.7
3,407,740	-				-0.3
3,407,742	-				-1.3
3,407,868	+				-0.7
3,407,910	-		HGI48_RS15140	0.12	+0.3
3,407,946	+		HGI48_RS15140	0.15	+0.3
3,407,971	-		HGI48_RS15140	0.17	-0.3
3,408,034	+		HGI48_RS15140	0.22	-0.2
3,408,035	-		HGI48_RS15140	0.23	-0.7
3,408,035	-		HGI48_RS15140	0.23	-1.0
3,408,110	+				+0.1
3,408,111	-		HGI48_RS15140	0.29	+0.4
3,408,111	-		HGI48_RS15140	0.29	+0.4
3,408,260	+		HGI48_RS15140	0.41	-2.1
3,408,261	-		HGI48_RS15140	0.41	+0.3
3,408,261	-		HGI48_RS15140	0.41	+1.7
3,408,428	+		HGI48_RS15140	0.55	-0.3
3,408,428	+		HGI48_RS15140	0.55	-0.8
3,408,428	+				+0.7
3,408,429	-		HGI48_RS15140	0.55	+0.3
3,408,491	+		HGI48_RS15140	0.60	-0.3
3,408,625	+		HGI48_RS15140	0.71	-0.3
3,408,626	-				+1.4
3,408,628	+		HGI48_RS15140	0.71	-1.3
3,408,628	+		HGI48_RS15140	0.71	-2.3
3,408,629	-		HGI48_RS15140	0.71	-0.3
3,408,629	-		HGI48_RS15140	0.71	-0.2
3,408,629	-				+0.7
3,408,629	-		HGI48_RS15140	0.71	+0.3
3,409,016	+				-1.7
3,409,016	+				+0.2
3,409,016	+				-0.1
3,409,017	-				+0.2
3,409,055	-		HGI48_RS15145	0.10	-1.3
3,409,055	-				+1.1
3,409,067	+		HGI48_RS15145	0.12	-0.3
3,409,119	+		HGI48_RS15145	0.18	-0.7
3,409,119	+				+0.7
3,409,120	-				+1.7
3,409,120	-		HGI48_RS15145	0.18	+0.5
3,409,120	-		HGI48_RS15145	0.18	-0.9
3,409,165	-		HGI48_RS15145	0.24	+0.3
3,409,165	-		HGI48_RS15145	0.24	+0.3
3,409,165	-		HGI48_RS15145	0.24	-1.7
3,409,178	+		HGI48_RS15145	0.26	+1.1
3,409,215	+		HGI48_RS15145	0.30	-0.6
3,409,216	-				+1.7
3,409,216	-		HGI48_RS15145	0.30	-1.7
3,409,217	+		HGI48_RS15145	0.31	-0.3
3,409,315	-		HGI48_RS15145	0.43	-1.3
3,409,427	+		HGI48_RS15145	0.57	-0.1
3,409,427	+		HGI48_RS15145	0.57	+0.2
3,409,427	+		HGI48_RS15145	0.57	+0.5
3,409,441	+		HGI48_RS15145	0.59	-1.5
3,409,581	+		HGI48_RS15145	0.76	-1.1
3,409,582	-		HGI48_RS15145	0.76	-0.9
3,409,649	+		HGI48_RS15145	0.85	-1.1
3,409,649	+				+1.9
3,409,649	+		HGI48_RS15145	0.85	+0.1
3,409,649	+		HGI48_RS15145	0.85	-2.1
3,409,649	+		HGI48_RS15145	0.85	-0.3
3,409,649	+		HGI48_RS15145	0.85	+0.2
3,409,649	+		HGI48_RS15145	0.85	-2.3
3,409,650	-		HGI48_RS15145	0.85	-0.7
3,409,650	-		HGI48_RS15145	0.85	-1.7
3,409,650	-		HGI48_RS15145	0.85	+0.9
3,409,650	-		HGI48_RS15145	0.85	-0.6
3,409,653	+		HGI48_RS15145	0.85	-0.3
3,409,653	+		HGI48_RS15145	0.85	+0.9
3,409,653	+		HGI48_RS15145	0.85	-1.9
3,409,654	-		HGI48_RS15145	0.85	-0.7
3,409,654	-		HGI48_RS15145	0.85	+0.3
3,409,654	-		HGI48_RS15145	0.85	-0.4
3,409,654	-		HGI48_RS15145	0.85	+0.9
3,409,729	+				-2.3
3,409,729	+				+0.0
3,409,730	-				-1.3
3,409,761	+				-0.3