Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14995

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,372,237	+		HGI48_RS14985	0.70	+0.4
3,372,260	+		HGI48_RS14985	0.73	-1.1
3,372,307	+		HGI48_RS14985	0.77	+0.3
3,372,308	-		HGI48_RS14985	0.77	+0.1
3,372,565	+				-1.3
3,372,566	-				+0.2
3,372,566	-				+0.7
3,372,566	-				-2.3
3,372,617	+				-0.7
3,372,617	+				-1.9
3,372,674	+				-0.9
3,372,679	+				+0.1
3,372,761	+				-0.1
3,372,761	+				+0.4
3,372,761	+				-0.1
3,372,761	+				+0.5
3,372,762	-				-0.2
3,372,762	-				+0.7
3,372,831	+				+0.1
3,372,832	-				+0.8
3,372,832	-				+0.9
3,372,832	-				-0.3
3,372,951	+		HGI48_RS14990	0.57	-0.7
3,372,957	-		HGI48_RS14990	0.60	+0.2
3,372,957	-		HGI48_RS14990	0.60	-0.3
3,372,960	+				+0.7
3,372,961	-		HGI48_RS14990	0.62	-1.3
3,372,961	-		HGI48_RS14990	0.62	-0.9
3,372,961	-		HGI48_RS14990	0.62	+0.8
3,372,961	-		HGI48_RS14990	0.62	-0.3
3,372,961	-		HGI48_RS14990	0.62	-0.2
3,373,015	-				-1.3
3,373,030	+				-2.2
3,373,031	-				+1.0
3,373,062	+				-0.7
3,373,062	+				+1.1
3,373,062	+				+0.4
3,373,063	-				+1.7
3,373,063	-				+0.7
3,373,088	-				+0.1
3,373,203	+				-0.3
3,373,203	+				+0.7
3,373,292	-				+0.7
3,373,398	-		HGI48_RS14995	0.18	-0.9
3,373,440	+		HGI48_RS14995	0.22	-1.7
3,373,512	-		HGI48_RS14995	0.29	-0.9
3,373,512	-		HGI48_RS14995	0.29	-0.2
3,373,631	+		HGI48_RS14995	0.40	-1.7
3,373,746	+		HGI48_RS14995	0.51	+1.2
3,373,746	+		HGI48_RS14995	0.51	-1.7
3,373,752	+		HGI48_RS14995	0.51	+0.2
3,373,752	+		HGI48_RS14995	0.51	-0.1
3,373,752	+		HGI48_RS14995	0.51	+0.5
3,373,753	-				+1.2
3,373,753	-		HGI48_RS14995	0.51	-0.5
3,373,753	-				+1.4
3,373,757	+		HGI48_RS14995	0.52	-3.0
3,373,758	-		HGI48_RS14995	0.52	+0.7
3,373,813	-		HGI48_RS14995	0.57	-0.3
3,373,904	-				+2.0
3,374,006	-		HGI48_RS14995	0.75	-2.2
3,374,220	+				+0.9
3,374,253	-				-0.1
3,374,310	+				-0.1
3,374,310	+				-1.2
3,374,310	+				-0.3
3,374,311	-				-0.8
3,374,575	-				+0.1
3,374,649	-				-1.1
3,374,742	-		HGI48_RS15000	0.16	+0.2
3,374,742	-		HGI48_RS15000	0.16	-2.7
3,374,771	+		HGI48_RS15000	0.18	-0.3
3,374,771	+		HGI48_RS15000	0.18	-0.4
3,374,771	+		HGI48_RS15000	0.18	+2.0
3,374,772	-		HGI48_RS15000	0.18	-2.8
3,374,772	-		HGI48_RS15000	0.18	+0.3
3,374,796	-		HGI48_RS15000	0.20	-0.8
3,374,955	-		HGI48_RS15000	0.32	+0.4
3,374,955	-		HGI48_RS15000	0.32	-1.6
3,374,955	-				+2.2
3,374,991	-		HGI48_RS15000	0.35	-0.9
3,374,991	-		HGI48_RS15000	0.35	-0.1
3,374,998	+		HGI48_RS15000	0.36	-0.5
3,374,998	+		HGI48_RS15000	0.36	-0.1
3,374,999	-		HGI48_RS15000	0.36	-1.9
3,375,031	+		HGI48_RS15000	0.38	-0.1
3,375,031	+				-0.9
3,375,031	+				-0.9
3,375,098	-		HGI48_RS15000	0.44	+0.4
3,375,128	+		HGI48_RS15000	0.46	-0.1
3,375,128	+		HGI48_RS15000	0.46	-0.1
3,375,128	+		HGI48_RS15000	0.46	-0.2
3,375,128	+		HGI48_RS15000	0.46	-1.9
3,375,129	-		HGI48_RS15000	0.46	-0.7
3,375,129	-		HGI48_RS15000	0.46	-0.6
3,375,129	-		HGI48_RS15000	0.46	+1.1
3,375,242	+		HGI48_RS15000	0.55	+1.8
3,375,243	-				+1.2