Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14080

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,148,740	+		HGI48_RS14070	0.87	+0.4
3,148,743	+		HGI48_RS14070	0.87	+0.7
3,148,756	+		HGI48_RS14070	0.88	+0.2
3,148,841	+				-0.4
3,148,842	-				-2.2
3,148,845	+				+0.1
3,148,846	-				-0.0
3,148,895	+				-0.9
3,148,927	+				+0.8
3,148,977	+				-0.0
3,148,978	-				-1.2
3,148,978	-				+0.9
3,148,978	-				-0.4
3,148,978	-				+0.3
3,148,978	-				-0.4
3,148,999	-				-0.0
3,149,045	+				-0.1
3,149,046	-				-0.4
3,149,046	-				-0.9
3,149,050	+				-0.3
3,149,050	+				-0.1
3,149,051	-				+0.6
3,149,051	-				-1.0
3,149,051	-				-0.4
3,149,156	-				-1.2
3,149,160	-				+0.2
3,149,274	+		HGI48_RS14075	0.25	-0.3
3,149,274	+		HGI48_RS14075	0.25	-2.7
3,149,277	-		HGI48_RS14075	0.26	-0.2
3,149,368	-		HGI48_RS14075	0.42	-0.4
3,149,368	-		HGI48_RS14075	0.42	-1.0
3,149,368	-		HGI48_RS14075	0.42	+0.9
3,149,373	+		HGI48_RS14075	0.43	+0.8
3,149,374	-		HGI48_RS14075	0.44	+0.4
3,149,374	-		HGI48_RS14075	0.44	-0.2
3,149,748	-				-1.6
3,150,000	+				+0.6
3,150,000	+		HGI48_RS14080	0.33	-0.3
3,150,000	+		HGI48_RS14080	0.33	-0.4
3,150,001	-		HGI48_RS14080	0.33	+0.3
3,150,001	-		HGI48_RS14080	0.33	+1.1
3,150,001	-		HGI48_RS14080	0.33	-2.0
3,150,079	+		HGI48_RS14080	0.42	-1.4
3,150,194	+		HGI48_RS14080	0.56	-0.9
3,150,194	+		HGI48_RS14080	0.56	+1.2
3,150,195	-		HGI48_RS14080	0.56	-1.4
3,150,195	-		HGI48_RS14080	0.56	+1.4
3,150,198	+		HGI48_RS14080	0.56	-0.0
3,150,198	+		HGI48_RS14080	0.56	-0.9
3,150,198	+				-1.0
3,150,199	-		HGI48_RS14080	0.57	+0.4
3,150,199	-		HGI48_RS14080	0.57	-0.1
3,150,350	-		HGI48_RS14080	0.75	+0.3
3,150,350	-				+0.6
3,150,379	+		HGI48_RS14080	0.78	-0.4
3,150,379	+		HGI48_RS14080	0.78	+0.5
3,150,379	+		HGI48_RS14080	0.78	+0.0
3,150,380	-		HGI48_RS14080	0.78	-0.7
3,150,380	-		HGI48_RS14080	0.78	+0.3
3,150,382	+				+2.3
3,150,449	-		HGI48_RS14080	0.87	-0.0
3,150,550	+				+1.3
3,150,602	+				-0.4
3,150,603	-				-0.4
3,150,621	+				+0.6
3,150,621	+				-1.6
3,150,622	-				+0.3
3,150,622	-				+0.3
3,150,622	-				+0.3
3,150,906	+		HGI48_RS14085	0.12	-0.4
3,150,906	+		HGI48_RS14085	0.12	-0.6
3,150,906	+		HGI48_RS14085	0.12	-2.3
3,150,907	-		HGI48_RS14085	0.12	+1.4
3,150,907	-		HGI48_RS14085	0.12	-1.0
3,150,907	-		HGI48_RS14085	0.12	-0.4
3,150,907	-		HGI48_RS14085	0.12	+0.1
3,150,907	-		HGI48_RS14085	0.12	-0.0
3,150,907	-		HGI48_RS14085	0.12	+0.1
3,150,907	-		HGI48_RS14085	0.12	-2.0
3,150,907	-		HGI48_RS14085	0.12	+0.5
3,151,186	+		HGI48_RS14085	0.23	-0.4
3,151,186	+		HGI48_RS14085	0.23	-0.6
3,151,186	+		HGI48_RS14085	0.23	+0.4
3,151,187	-		HGI48_RS14085	0.23	+1.1
3,151,255	+		HGI48_RS14085	0.25	+0.8
3,151,416	+		HGI48_RS14085	0.31	-1.7
3,151,416	+				+1.0
3,151,417	-		HGI48_RS14085	0.31	-1.0