Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13825

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,079,426	+		HGI48_RS13815	0.84	-0.4
3,079,427	-		HGI48_RS13815	0.84	+0.2
3,079,494	-		HGI48_RS13815	0.88	-0.6
3,079,496	+		HGI48_RS13815	0.89	-0.8
3,079,496	+		HGI48_RS13815	0.89	-0.8
3,079,497	-		HGI48_RS13815	0.89	+0.7
3,079,497	-		HGI48_RS13815	0.89	-0.8
3,079,497	-		HGI48_RS13815	0.89	-1.6
3,079,509	-		HGI48_RS13815	0.89	-0.3
3,079,539	-				-2.5
3,079,624	-				-0.4
3,079,659	+				-0.4
3,079,659	+				-0.5
3,079,659	+				+0.8
3,079,660	-				+0.6
3,079,660	-				-1.0
3,079,660	-				-0.9
3,079,660	-				+0.2
3,079,682	+				+0.9
3,079,682	+				-1.7
3,079,683	-				+1.3
3,079,692	+				-1.9
3,079,976	+				-2.2
3,079,976	+				-0.4
3,080,002	+				-1.2
3,080,013	+				-0.6
3,080,023	+				-0.4
3,080,023	+				-0.2
3,080,027	+				-0.6
3,080,101	+				-2.2
3,080,101	+				-1.2
3,080,102	-				+0.6
3,080,138	+				-0.6
3,080,141	+				+1.3
3,080,187	-				-1.0
3,080,187	-				+0.4
3,080,212	+				-1.0
3,080,355	-				-0.8
3,080,419	-		HGI48_RS13825	0.47	+0.1
3,080,672	-				+0.1
3,080,706	-				+0.6
3,080,937	+		HGI48_RS13830	0.25	-1.8
3,081,000	+		HGI48_RS13830	0.30	-2.4
3,081,000	+		HGI48_RS13830	0.30	-0.4
3,081,000	+				+0.6
3,081,001	-		HGI48_RS13830	0.30	-0.4
3,081,001	-		HGI48_RS13830	0.30	-0.1
3,081,001	-		HGI48_RS13830	0.30	-0.7
3,081,001	-		HGI48_RS13830	0.30	+0.0
3,081,001	-				-1.0
3,081,001	-		HGI48_RS13830	0.30	+1.5
3,081,001	-		HGI48_RS13830	0.30	-0.1
3,081,001	-		HGI48_RS13830	0.30	-0.0
3,081,120	+		HGI48_RS13830	0.39	-0.4
3,081,120	+		HGI48_RS13830	0.39	+0.7
3,081,384	+		HGI48_RS13830	0.60	+0.9
3,081,384	+		HGI48_RS13830	0.60	+0.9
3,081,384	+		HGI48_RS13830	0.60	-0.3
3,081,385	-				-0.0
3,081,385	-		HGI48_RS13830	0.60	-0.4
3,081,396	+		HGI48_RS13830	0.60	+0.5
3,081,397	-		HGI48_RS13830	0.61	-0.2